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Protein
Submitted name:

RNA-binding protein 28

Gene

RBM28

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein 28Imported
Gene namesi
Name:RBM28Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 7

Organism-specific databases

EuPathDBiHostDB:ENSG00000106344.8
HGNCiHGNC:21863 RBM28

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000106344

PTM / Processingi

Proteomic databases

MaxQBiC9JAA9
PeptideAtlasiC9JAA9
PRIDEiC9JAA9

Expressioni

Gene expression databases

BgeeiENSG00000106344 Expressed in 224 organ(s), highest expression level in corpus callosum
ExpressionAtlasiC9JAA9 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliC9JAA9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 80RRMInterPro annotationAdd BLAST77

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili183 – 203Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00550000074976

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

C9JAA9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAGLTLFVGR LPPSARSEQL EELFSQVGPV KQCFVVTEKG SKACRGFGYV
60 70 80 90 100
TFSMLEDVQR ALKEITTFEG CKINVTVAKK KLRNKTKEKG KNENSECPKK
110 120 130 140 150
EPKAKKAKVA DKKARLIIRN LSFKCSEDDL KTVFAQFGAV LEVNIPRKPG
160 170 180 190 200
RTVAVDWAVA KDKYKDTQSV SAIGEEKSHE SKHQESVKKK GREEEDMEEE
210 220 230 240 250
ENDDDDDDDD EEDGVFDDED EEEENIESKV TKPVQIQKRA VKRPAPAKSS
260 270 280
DHSEEDSDLE ESDSIDDGEE LAQSDTSTEE QED
Length:283
Mass (Da):31,784
Last modified:November 3, 2009 - v1
Checksum:iB52740DA5C28AD2B
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9NW13RBM28_HUMAN
RNA-binding protein 28
RBM28
759Annotation score:
H7C5G8H7C5G8_HUMAN
RNA-binding protein 28
RBM28
186Annotation score:
C9JE21C9JE21_HUMAN
RNA-binding protein 28
RBM28
204Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei283Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010655 Genomic DNA No translation available.
AC018635 Genomic DNA No translation available.
KF510276 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000478061; ENSP00000418071; ENSG00000106344
UCSCiuc064hth.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010655 Genomic DNA No translation available.
AC018635 Genomic DNA No translation available.
KF510276 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliC9JAA9
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiC9JAA9
PeptideAtlasiC9JAA9
PRIDEiC9JAA9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000478061; ENSP00000418071; ENSG00000106344
UCSCiuc064hth.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000106344.8
HGNCiHGNC:21863 RBM28
OpenTargetsiENSG00000106344
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00550000074976

Miscellaneous databases

ChiTaRSiRBM28 human

Gene expression databases

BgeeiENSG00000106344 Expressed in 224 organ(s), highest expression level in corpus callosum
ExpressionAtlasiC9JAA9 baseline and differential

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiC9JAA9_HUMAN
AccessioniPrimary (citable) accession number: C9JAA9
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: September 12, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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