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Protein
Submitted name:

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1

Gene

SMARCAL1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1Imported
Gene namesi
Name:SMARCAL1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 2

Organism-specific databases

EuPathDBiHostDB:ENSG00000138375.12
HGNCiHGNC:11102 SMARCAL1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000138375

PTM / Processingi

Proteomic databases

MaxQBiC9J8F8
PeptideAtlasiC9J8F8
PRIDEiC9J8F8

Expressioni

Gene expression databases

BgeeiENSG00000138375 Expressed in 96 organ(s), highest expression level in corpus callosum
ExpressionAtlasiC9J8F8 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliC9J8F8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili3 – 31Sequence analysisAdd BLAST29

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1000 Eukaryota
COG0553 LUCA
GeneTreeiENSGT00910000144109

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 8 potential isoforms that are computationally mapped.Show allAlign All

C9J8F8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSLPLTEEQR KKIEENRQKA LARRAEKLLA EQHQRTSSGT SIAGNPFQAK
60 70 80 90 100
QGPSQNFPRE SCKPVSHGVI FKQQNLSSSS NADQRPHDSH SFQAKGIWKK
110 120 130
PEEMPTACPG HSPRSQMALT GISPPLAQSP
Length:130
Mass (Da):14,337
Last modified:November 3, 2009 - v1
Checksum:i10E30DE732F12BF3
GO

Computationally mapped potential isoform sequencesi

There are 8 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9NZC9SMAL1_HUMAN
SWI/SNF-related matrix-associated a...
SMARCAL1 HARP
954Annotation score:
H7BYI2H7BYI2_HUMAN
SWI/SNF-related matrix-associated a...
SMARCAL1
796Annotation score:
H7C051H7C051_HUMAN
SWI/SNF-related matrix-associated a...
SMARCAL1
325Annotation score:
H7C1I3H7C1I3_HUMAN
SWI/SNF-related matrix-associated a...
SMARCAL1
161Annotation score:
C9JHQ1C9JHQ1_HUMAN
SWI/SNF-related matrix-associated a...
SMARCAL1
141Annotation score:
C9JP32C9JP32_HUMAN
SWI/SNF-related matrix-associated a...
SMARCAL1
92Annotation score:
C9J6I8C9J6I8_HUMAN
SWI/SNF-related matrix-associated a...
SMARCAL1
145Annotation score:
C9JS37C9JS37_HUMAN
SWI/SNF-related matrix-associated a...
SMARCAL1
19Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei130Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC098820 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000444508; ENSP00000398969; ENSG00000138375
UCSCiuc061sfb.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC098820 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliC9J8F8
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiC9J8F8
PeptideAtlasiC9J8F8
PRIDEiC9J8F8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000444508; ENSP00000398969; ENSG00000138375
UCSCiuc061sfb.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000138375.12
HGNCiHGNC:11102 SMARCAL1
OpenTargetsiENSG00000138375
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1000 Eukaryota
COG0553 LUCA
GeneTreeiENSGT00910000144109

Miscellaneous databases

ChiTaRSiSMARCAL1 human

Gene expression databases

BgeeiENSG00000138375 Expressed in 96 organ(s), highest expression level in corpus callosum
ExpressionAtlasiC9J8F8 baseline and differential

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiC9J8F8_HUMAN
AccessioniPrimary (citable) accession number: C9J8F8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: September 12, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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