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Protein
Submitted name:

RANBP2-like and GRIP domain-containing protein 5/6

Gene

RGPD5

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
RANBP2-like and GRIP domain-containing protein 5/6Imported
Gene namesi
Name:RGPD5Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 2

Organism-specific databases

EuPathDBiHostDB:ENSG00000015568.12
HGNCiHGNC:32418 RGPD5

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000015568

PTM / Processingi

Proteomic databases

MaxQBiC9J1W9
PeptideAtlasiC9J1W9
PRIDEiC9J1W9

Expressioni

Gene expression databases

BgeeiENSG00000015568 Expressed in 201 organ(s), highest expression level in testis
ExpressionAtlasiC9J1W9 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliC9J1W9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 92TPR_REGIONInterPro annotationAdd BLAST68
Repeati59 – 92TPRPROSITE-ProRule annotationAdd BLAST34

Keywords - Domaini

RepeatSAAS annotation, TPR repeatPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0864 Eukaryota
COG5171 LUCA
GeneTreeiENSGT00760000119119

Family and domain databases

Gene3Di1.25.40.10, 1 hit
InterProiView protein in InterPro
IPR013026 TPR-contain_dom
IPR011990 TPR-like_helical_dom_sf
IPR001440 TPR_1
IPR019734 TPR_repeat
PfamiView protein in Pfam
PF00515 TPR_1, 1 hit
SMARTiView protein in SMART
SM00028 TPR, 1 hit
SUPFAMiSSF48452 SSF48452, 1 hit
PROSITEiView protein in PROSITE
PS50005 TPR, 1 hit
PS50293 TPR_REGION, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 8 potential isoforms that are computationally mapped.Show allAlign All

C9J1W9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRRSKADVER YVASVLGLTP SPRQSMKGFY FAKLYYEAKE YDLAKKYICT
60 70 80 90 100
YINVQERDPK AHRFLGLLYE LEENTEKAVE CYRRSVELNP TQKDLVLKIA
110 120 130
ELLCKNDVTD GRAKYWVERA AKLFPGSPAI YKLK
Length:134
Mass (Da):15,653
Last modified:November 3, 2009 - v1
Checksum:i711E4751A3960059
GO

Computationally mapped potential isoform sequencesi

There are 8 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
O14715RGPD8_HUMAN
RANBP2-like and GRIP domain-contain...
RGPD8 RANBP2ALPHA, RANBP2L1, RANBP2L3
1,765Annotation score:
J3KQ37J3KQ37_HUMAN
RANBP2-like and GRIP domain-contain...
RGPD8
1,625Annotation score:
F8W705F8W705_HUMAN
RANBP2-like and GRIP domain-contain...
RGPD8
904Annotation score:
C9J6W1C9J6W1_HUMAN
RANBP2-like and GRIP domain-contain...
RGPD8 RGPD5
152Annotation score:
H0YBN8H0YBN8_HUMAN
RANBP2-like and GRIP domain-contain...
RGPD5 RGPD6, RGPD8
98Annotation score:
C9JF75C9JF75_HUMAN
RANBP2-like and GRIP domain-contain...
RGPD6
135Annotation score:
C9J1P2C9J1P2_HUMAN
RANBP2-like and GRIP domain-contain...
RGPD6 RGPD5
56Annotation score:
H7BZ48H7BZ48_HUMAN
RANBP2-like and GRIP domain-contain...
RGPD6
202Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei134Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC013271 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000430736; ENSP00000392556; ENSG00000015568
UCSCiuc061mtp.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC013271 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliC9J1W9
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiC9J1W9
PeptideAtlasiC9J1W9
PRIDEiC9J1W9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000430736; ENSP00000392556; ENSG00000015568
UCSCiuc061mtp.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000015568.12
HGNCiHGNC:32418 RGPD5
OpenTargetsiENSG00000015568
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG0864 Eukaryota
COG5171 LUCA
GeneTreeiENSGT00760000119119

Miscellaneous databases

ChiTaRSiRGPD5 human

Gene expression databases

BgeeiENSG00000015568 Expressed in 201 organ(s), highest expression level in testis
ExpressionAtlasiC9J1W9 baseline and differential

Family and domain databases

Gene3Di1.25.40.10, 1 hit
InterProiView protein in InterPro
IPR013026 TPR-contain_dom
IPR011990 TPR-like_helical_dom_sf
IPR001440 TPR_1
IPR019734 TPR_repeat
PfamiView protein in Pfam
PF00515 TPR_1, 1 hit
SMARTiView protein in SMART
SM00028 TPR, 1 hit
SUPFAMiSSF48452 SSF48452, 1 hit
PROSITEiView protein in PROSITE
PS50005 TPR, 1 hit
PS50293 TPR_REGION, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiC9J1W9_HUMAN
AccessioniPrimary (citable) accession number: C9J1W9
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: September 12, 2018
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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