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Protein

Lipoxygenase homology domain-containing protein 1

Gene

Loxhd1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Required for normal function of hair cells in the inner ear.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

  • sensory perception of sound Source: MGI

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processHearing

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Lipoxygenase homology domain-containing protein 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Loxhd1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 18

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1914609 Loxhd1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Cell projection

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003933301 – 2068Lipoxygenase homology domain-containing protein 1Add BLAST2068

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
C8YR32

PRoteomics IDEntifications database

More...
PRIDEi
C8YR32

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
C8YR32

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
C8YR32

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in the inner ear, specifically in hair cells. Higher expression is detected in the cochlea.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000032818 Expressed in 8 organ(s), highest expression level in testis

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
C8YR32 baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
232198, 1 interactor

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000094294

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
C8YR32

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
C8YR32

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini43 – 160PLAT 1PROSITE-ProRule annotationAdd BLAST118
Domaini172 – 287PLAT 2PROSITE-ProRule annotationAdd BLAST116
Domaini296 – 412PLAT 3PROSITE-ProRule annotationAdd BLAST117
Domaini425 – 540PLAT 4PROSITE-ProRule annotationAdd BLAST116
Domaini553 – 673PLAT 5PROSITE-ProRule annotationAdd BLAST121
Domaini684 – 803PLAT 6PROSITE-ProRule annotationAdd BLAST120
Domaini814 – 934PLAT 7PROSITE-ProRule annotationAdd BLAST121
Domaini970 – 1088PLAT 8PROSITE-ProRule annotationAdd BLAST119
Domaini1101 – 1226PLAT 9PROSITE-ProRule annotationAdd BLAST126
Domaini1255 – 1373PLAT 10PROSITE-ProRule annotationAdd BLAST119
Domaini1422 – 1540PLAT 11PROSITE-ProRule annotationAdd BLAST119
Domaini1553 – 1668PLAT 12PROSITE-ProRule annotationAdd BLAST116
Domaini1680 – 1798PLAT 13PROSITE-ProRule annotationAdd BLAST119
Domaini1811 – 1932PLAT 14PROSITE-ProRule annotationAdd BLAST122
Domaini1949 – 2065PLAT 15PROSITE-ProRule annotationAdd BLAST117

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IJEB Eukaryota
ENOG410XTDU LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00390000018830

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000030975

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
C8YR32

Database of Orthologous Groups

More...
OrthoDBi
20587at2759

TreeFam database of animal gene trees

More...
TreeFami
TF350466

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.40.180.10, 11 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR037060 Catalase_core_sf
IPR001024 PLAT/LH2_dom
IPR036392 PLAT/LH2_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01477 PLAT, 15 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00308 LH2, 13 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49723 SSF49723, 15 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50095 PLAT, 15 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

C8YR32-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MMAQKKKRRK KDIDFLGLYE EELLNYDSED GEDELEHEYY KAKVYEVVTA
60 70 80 90 100
TGDVRGAGTD ANVFITLFGE NGLSPKLHLT SKSESAFEKA NVDVFRVRTN
110 120 130 140 150
NVGLIYKIRI EHDNTGLNAS WYLDRVIVTD MKRPHLRYYF NCNNWLSKVE
160 170 180 190 200
GDRQWCRDLL ASFDPMDMPR GNKYEIKVYT GDVIGAGTDA DVFINIFGEY
210 220 230 240 250
GDTGERRLEN EKDNFEKGAE DKFTLDAPDL GQLMKINVGH NNKGGSAGWF
260 270 280 290 300
LSKIIIEDIG NKRKYDFPLN RWLALDEDDG KIQRDILVGG AETTAITYIV
310 320 330 340 350
TVFTGDIRGA GTKSKIYLVM YGARGNKNSG KIFLEGGVFD RGRTDIFHID
360 370 380 390 400
LAVLLSPLSR VSIGHGNIGV NRGWYCEKVV ILCPFTGIQQ TFPCSNWLDE
410 420 430 440 450
KKADGLIERQ LYEMVSLRKK RLKKYPWSLW VWTTDLKKAG TNSPIFIQIY
460 470 480 490 500
GKKGRTDEIL LNPNNKWFKP GIIEKFRMEL PDLGRFYKIR AWHDRQNPGS
510 520 530 540 550
GWHLEKMTLM NTINKDKYNF NCNRWLDANE DDNEIVREMT AEGPTVRRIM
560 570 580 590 600
GMARYRVTVC TGELEGAGTD ANVYLCLFGD VGDTGERLLY NCRNNTDLFE
610 620 630 640 650
KGNADEFTIE SVTMRKVRRV RVRHDGKGSG SGWYLDRVLV REEGQPESDN
660 670 680 690 700
VEFPCLRWLD KDKDDGQLVR ELLPSDSNAT LKNFRYHISV KTGDVSGAST
710 720 730 740 750
DSRVYIKLYG EKSDTIKQVL LVSDNNLKDY FERGRVDEFT LETLNIGTIN
760 770 780 790 800
RLVIGHDSTG MHAGWFLGSV QIRVPRQGKQ YTFPANRWLD KNQADGRLEV
810 820 830 840 850
ELYPSEVVEI QKLVHYEIEI WTGDVGGAGT TSRVFVQIYG EEGKTEVLFL
860 870 880 890 900
SSRSKVFDRG SKDIFQTDTF TIYAIDLGAL TKIRIRHDNT GNRPGWFLDR
910 920 930 940 950
VDITDVNNET TYYFPCQRWL AVEEDDGQLS RELLPVDESY VLPSEDEEGG
960 970 980 990 1000
GQGDNNPLDN LALEQKDKST TFSVTIKTGD KKNAGTDANV FITLFGTQDN
1010 1020 1030 1040 1050
NGMTLLKSSK TNSDKFERDS IEIFTVETLD LGDLWKVRIG HDNTGKAPGW
1060 1070 1080 1090 1100
FVDWVEVDAP SLGKCMTFPC GRWLAKNEDD GSIVRDLFHA ELQTRLYTPF
1110 1120 1130 1140 1150
VPYEITLYTS DVFAAGTDAN IFIVIYGCDA VCTRQKFLCT NKREQKLFFE
1160 1170 1180 1190 1200
RKSASRFIVE LEDVGEIIEK IRIGHDNTGI NPGWHCSHVD IRRLLPEKDG
1210 1220 1230 1240 1250
TETLTFPCDR WLATSEDDKK TIRELVPYDI FTEKYMKDGS LRQVYKEVEE
1260 1270 1280 1290 1300
PLDIVLYSVQ IFTGNVPGAG TDAKVYITIY GDLGDTGERY LGKSENRTNK
1310 1320 1330 1340 1350
FEKGTADTFI IEAADLGVIY KIKLRHDNTK WCADWYVEKV EIWNDTNEDE
1360 1370 1380 1390 1400
FLFLCGRWLS LKKEDGRLER LFYEKEYTGD RSSNCSSPAD FWEIALSSKM
1410 1420 1430 1440 1450
ADVDIDTVTG PMVDYVQDGP VIPYYVSVTT GKHKEAATDS RAFVLLIGED
1460 1470 1480 1490 1500
DECTNRIWLD YPQGKRGFSC GSVEEFYVGG LDVGIIKKIE LGHDGASPES
1510 1520 1530 1540 1550
CWLVEELCLA VPTQGTKYTL RCNCWLAKDR GDGVTSRVFD LLDAMVVNIG
1560 1570 1580 1590 1600
KKVLYEMTVW TGDVVGGGTD SNIFMTLYGI NGSTEEVQLD KKKARFEREQ
1610 1620 1630 1640 1650
NDTFIMEILD IAPFTKMRIR IDGMGSRPEW FLERILLKNM NTGDLTMFYY
1660 1670 1680 1690 1700
GDWLSQKKGK KTLVCEICAV IDGEEMMEWT SYTVSVKTSD ILGAGTDANV
1710 1720 1730 1740 1750
FIIIFGENGD SGTLALKQSA NWNKFERNNT DTFNFSDMLS LGHLCKLRVW
1760 1770 1780 1790 1800
HDNKGIFPGW HLSYVDVKDN SRDETFRFQC DCWLSKSEGD RQTLRDFACA
1810 1820 1830 1840 1850
NNEIRDELEE TTYEIVIETG NGGETRENVW LILEGRKNRS KEFLVENSSR
1860 1870 1880 1890 1900
QRAFRKGTTD TFEFDSIFLG DIASLCVGHL AREDRFIPKR ELVWHVKTIT
1910 1920 1930 1940 1950
ITEMEYGNVY FFNCDCLIPL KRKRKYFKVF EVTKTTESFA SKIQSLVPVK
1960 1970 1980 1990 2000
YEVIVTTGYE PGAGTDANVF VTIFGANGDT GKRELKQKMR NLFERGSTDR
2010 2020 2030 2040 2050
FFLETLELGE LRKVRLEHDS SGYYSGWLVE KVEVTNTSTG VATIFSCGRW
2060
LDKSRGDGLT WRELFPSV
Length:2,068
Mass (Da):235,757
Last modified:November 3, 2009 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i65B9CEE21632016B
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
D3YUR7D3YUR7_MOUSE
Lipoxygenase homology domain-contai...
Loxhd1
1,478Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
E9PVB2E9PVB2_MOUSE
Lipoxygenase homology domain-contai...
Loxhd1
996Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6XPZ0F6XPZ0_MOUSE
Lipoxygenase homology domain-contai...
Loxhd1
1,214Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6QGA9F6QGA9_MOUSE
Lipoxygenase homology domain-contai...
Loxhd1
516Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural varianti1342I → N in the samba murine model of hearing loss. 1 Publication1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
FJ750876 mRNA Translation: ACV52550.1
AK007091 mRNA Translation: BAC25164.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS50326.1

NCBI Reference Sequences

More...
RefSeqi
NP_766422.2, NM_172834.2

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
Mm.380247

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000096547; ENSMUSP00000094294; ENSMUSG00000032818

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
240411

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:240411

UCSC genome browser

More...
UCSCi
uc012bfd.1 mouse

Keywords - Coding sequence diversityi

Polymorphism

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FJ750876 mRNA Translation: ACV52550.1
AK007091 mRNA Translation: BAC25164.1
CCDSiCCDS50326.1
RefSeqiNP_766422.2, NM_172834.2
UniGeneiMm.380247

3D structure databases

ProteinModelPortaliC8YR32
SMRiC8YR32
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi232198, 1 interactor
STRINGi10090.ENSMUSP00000094294

PTM databases

iPTMnetiC8YR32
PhosphoSitePlusiC8YR32

Proteomic databases

PaxDbiC8YR32
PRIDEiC8YR32

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000096547; ENSMUSP00000094294; ENSMUSG00000032818
GeneIDi240411
KEGGimmu:240411
UCSCiuc012bfd.1 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
125336
MGIiMGI:1914609 Loxhd1

Phylogenomic databases

eggNOGiENOG410IJEB Eukaryota
ENOG410XTDU LUCA
GeneTreeiENSGT00390000018830
HOGENOMiHOG000030975
InParanoidiC8YR32
OrthoDBi20587at2759
TreeFamiTF350466

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Loxhd1 mouse

Protein Ontology

More...
PROi
PR:C8YR32

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000032818 Expressed in 8 organ(s), highest expression level in testis
ExpressionAtlasiC8YR32 baseline and differential

Family and domain databases

Gene3Di2.40.180.10, 11 hits
InterProiView protein in InterPro
IPR037060 Catalase_core_sf
IPR001024 PLAT/LH2_dom
IPR036392 PLAT/LH2_dom_sf
PfamiView protein in Pfam
PF01477 PLAT, 15 hits
SMARTiView protein in SMART
SM00308 LH2, 13 hits
SUPFAMiSSF49723 SSF49723, 15 hits
PROSITEiView protein in PROSITE
PS50095 PLAT, 15 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiLOXH1_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: C8YR32
Secondary accession number(s): Q8BMY5
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 20, 2010
Last sequence update: November 3, 2009
Last modified: January 16, 2019
This is version 67 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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