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Protein
Submitted name:

DNA-directed RNA polymerase

Gene

Mefer_0872

Organism
Methanocaldococcus fervens (strain DSM 4213 / JCM 15782 / AG86) (Methanococcus fervens)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferaseImported, Transferase
Biological processTranscription

Enzyme and pathway databases

BioCyciMFER573064:G1GFN-899-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-directed RNA polymeraseImported (EC:2.7.7.6Imported)
Gene namesi
Ordered Locus Names:Mefer_0872Imported
OrganismiMethanocaldococcus fervens (strain DSM 4213 / JCM 15782 / AG86) (Methanococcus fervens)Imported
Taxonomic identifieri573064 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
Proteomesi
  • UP000001495 Componenti: Chromosome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymeraseImported

Interactioni

Protein-protein interaction databases

STRINGi573064.Mefer_0872

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini82 – 166S1 motifInterPro annotationAdd BLAST85

Phylogenomic databases

eggNOGiarCOG00675 Archaea
COG1095 LUCA
HOGENOMiHOG000229315
KOiK03049
OMAiMRQPGLG
OrthoDBiPOG093Z0C8D

Family and domain databases

Gene3Di3.30.1490.120, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR036898 RNA_pol_Rpb7-like_N_sf
IPR005576 RNA_pol_Rpb7_N
IPR004519 RNAP_E/RPC8
IPR022967 S1_dom
IPR003029 S1_domain
PfamiView protein in Pfam
PF00575 S1, 1 hit
PF03876 SHS2_Rpb7-N, 1 hit
SMARTiView protein in SMART
SM00316 S1, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
SSF88798 SSF88798, 1 hit
TIGRFAMsiTIGR00448 rpoE, 1 hit
PROSITEiView protein in PROSITE
PS50126 S1, 1 hit

Sequencei

Sequence statusi: Complete.

C7P808-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYKILEIADV VRVPPEEFGK DLKETIKKIL IEKYEGRLDK DVGFILSIVD
60 70 80 90 100
VKEVGDGKVV HGDGSAYHPV VFETLVYVPE MYELVEGEVV DVVEFGSFVR
110 120 130 140 150
LGPLDGLIHV SQIMDDYVSY DPKREAIIGK ETGKVLEIGD YVRARIVAIS
160 170 180
LKAERKRGSK IALTMRQPYL GKLEWIEEEK AKKEHQE
Length:187
Mass (Da):21,236
Last modified:October 13, 2009 - v1
Checksum:i055D27A6DAE131FA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001696 Genomic DNA Translation: ACV24690.1
RefSeqiWP_015791427.1, NC_013156.1

Genome annotation databases

EnsemblBacteriaiACV24690; ACV24690; Mefer_0872
GeneIDi8365560
KEGGimfe:Mefer_0872

Similar proteinsi

Entry informationi

Entry nameiC7P808_METFA
AccessioniPrimary (citable) accession number: C7P808
Entry historyiIntegrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: March 28, 2018
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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