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Protein
Submitted name:

Beta-galactosidase

Gene

Phep_2816

Organism
Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseSAAS annotation, Hydrolase

Enzyme and pathway databases

BioCyciPHEP485917:G1GFH-2805-MONOMER

Protein family/group databases

CAZyiCBM57 Carbohydrate-Binding Module Family 57
GH2 Glycoside Hydrolase Family 2

Names & Taxonomyi

Protein namesi
Submitted name:
Beta-galactosidaseImported
Gene namesi
Ordered Locus Names:Phep_2816Imported
OrganismiPedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3)Imported
Taxonomic identifieri485917 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaePedobacter
Proteomesi
  • UP000000852 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_500297446122 – 1171Sequence analysisAdd BLAST1150

Interactioni

Protein-protein interaction databases

STRINGi485917.Phep_2816

Structurei

3D structure databases

ProteinModelPortaliC6Y1M3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini60 – 193Glyco_hydro_2_NInterPro annotationAdd BLAST134
Domaini211 – 311Glyco_hydro_2InterPro annotationAdd BLAST101
Domaini325 – 459Glyco_hydro_2_CInterPro annotationAdd BLAST135
Domaini629 – 692DUF4982InterPro annotationAdd BLAST64
Domaini725 – 890MalectinInterPro annotationAdd BLAST166

Sequence similaritiesi

Belongs to the glycosyl hydrolase 2 family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4107WVP Bacteria
COG3250 LUCA
HOGENOMiHOG000274580
OMAiFGVHIWN
OrthoDBiPOG091H2YSN

Family and domain databases

Gene3Di2.60.120.260, 2 hits
2.60.40.10, 2 hits
InterProiView protein in InterPro
IPR036156 Beta-gal/glucu_dom_sf
IPR032311 DUF4982
IPR008979 Galactose-bd-like_sf
IPR006101 Glyco_hydro_2
IPR006103 Glyco_hydro_2_cat
IPR006102 Glyco_hydro_2_Ig-like
IPR006104 Glyco_hydro_2_N
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR021720 Malectin
PfamiView protein in Pfam
PF16355 DUF4982, 1 hit
PF00703 Glyco_hydro_2, 1 hit
PF02836 Glyco_hydro_2_C, 1 hit
PF02837 Glyco_hydro_2_N, 1 hit
PF11721 Malectin, 1 hit
PRINTSiPR00132 GLHYDRLASE2
SUPFAMiSSF49303 SSF49303, 1 hit
SSF49785 SSF49785, 1 hit
SSF51445 SSF51445, 1 hit

Sequencei

Sequence statusi: Complete.

C6Y1M3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRRSAVAFL ICMLTSFTVF SQTGQRKSIA LNQGWQSIAD DTNINAYKGF
60 70 80 90 100
EAVGFNDKSW KTVDVPHNWD QYEGYRRMLH GNRHGYAWYR KTFVSKAQKA
110 120 130 140 150
GKRFFLYFEG VSSYATVWLN GKKVGYHAGG RTTFTLDVTE AIKLNSQPNV
160 170 180 190 200
LAVRADHPAN IRDLPWVDGG CSTERGFSEG SQPMGIFRPV QLLITSDVRI
210 220 230 240 250
EPFGVHIWNN DQVSEKSALL NFETTLKNYS LQSRDITIVH TLLDQAGHKV
260 270 280 290 300
KEFSRSAKLS GKTTFSFTQK DNEISNPKLW SLENPYLYTL RTAVIENGKV
310 320 330 340 350
IDQVDNPYGI RWISWPVGEN PADARRFLLN GKPVFINGVA EYEHLIGQSH
360 370 380 390 400
AFSNEQIRSR VMQIKAAGFN AFRDAHQPHN LLYQEYWDKL GILSWTQMAA
410 420 430 440 450
HIWYDTPEFR KNFKNLLTDW VKERRNSPSV VLWGLENEST LPEDFARECT
460 470 480 490 500
ELIRRLDPTA SSQRKVTTCN GGKGTDWDVP QNWTGTYGGD PLTYAEDVQR
510 520 530 540 550
QVLIGEYGAW RTLDLHTEGP FMQKGQYSEN NMTQLMETKV RLAESVKDKT
560 570 580 590 600
AGHYFWLFSS HDNPGRVQGG EGLRELDRVG PVNYKGLFTP WEEPLDVFYM
610 620 630 640 650
FRANYAPKET EPMVYIVSHT WPERWLKPGK KDSITIYSNC DEVELFNDVN
660 670 680 690 700
AISLGKRKRA GTGTHFQWDA VDVQYNVLYA IGYVNGKAVA KDYIVLNNLP
710 720 730 740 750
KSPHFEEFNK GAENITKPAA GYQYLYRINC GGPEYKDQNG QLWSPDRALT
760 770 780 790 800
KGGFGSVSWT AGFPGMPVFF ASQRRTFDPV KGTADWPLFQ SFRYGRDQLS
810 820 830 840 850
YHFPVPDGEY LVELYFIEPW LGTGGGMDAK GMRLFDVAIN GNTLLKDVDI
860 870 880 890 900
WAAAGHDAAL KKTVKARVKG GTLLLSFPRV KSGQALISAI AVASANKNII
910 920 930 940 950
PAKQSNAIIE PLKAIQISTW MDLGDQQYSD GQTAFTSLPS ALYGAEWIRT
960 970 980 990 1000
AGQSAIAEAF KVSGDADVYV AADAVAQLDW LQGYEDTKST ITNNAGTTFK
1010 1020 1030 1040 1050
VYRKHAVKGE HIVPGPKAAN TSMYTLAVLP KTNMQPAYDL KAVTSYKAAD
1060 1070 1080 1090 1100
AALKGEGLVK EILMEKERVT FKKPSGDVLE FTISVGVADT YSLTVKYHNP
1110 1120 1130 1140 1150
FEHTLKGKIE VLTMDGTVLK PAETIAFSPA KKGKWNYFSI NTGTMINAGT
1160 1170
YKVRLIAEDA AGLSIDAVDV Q
Length:1,171
Mass (Da):131,236
Last modified:September 22, 2009 - v1
Checksum:i30035665B9661994
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001681 Genomic DNA Translation: ACU05015.1
RefSeqiWP_015808626.1, NZ_AQGK01000001.1

Genome annotation databases

EnsemblBacteriaiACU05015; ACU05015; Phep_2816
KEGGiphe:Phep_2816

Similar proteinsi

Entry informationi

Entry nameiC6Y1M3_PEDHD
AccessioniPrimary (citable) accession number: C6Y1M3
Entry historyiIntegrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: February 28, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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