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UniProtKB - C6X167 (C6X167_FLAB3)

Entry version 49 (13 Nov 2019)
Sequence version 1 (22 Sep 2009)
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Protein
Submitted name:

Uncharacterized protein

Gene

FIC_01737

Organism
Flavobacteriaceae bacterium (strain 3519-10)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...BioCyci		FBAC531844:G1GFD-1721-MONOMER

Protein family/group databases

Carbohydrate-Active enZymes

More...CAZyi		GH115 Glycoside Hydrolase Family 115

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:FIC_01737Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiFlavobacteriaceae bacterium (strain 3519-10)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri531844 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001512 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 23Sequence analysisAdd BLAST23
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_500297053124 – 839Sequence analysisAdd BLAST816

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		531844.FIC_01737

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini84 – 154Glyco_hydro_67NInterPro annotationAdd BLAST71
Domaini670 – 835GH115_CInterPro annotationAdd BLAST166

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG4105CVY Bacteria
ENOG410XNPT LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000180457

Identification of Orthologs from Complete Genome Data

More...OMAi		DQTHIGY

Database of Orthologous Groups

More...OrthoDBi		166825at2

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.20.20.520, 1 hit
3.30.379.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR031924 GH115
IPR041437 GH115_C
IPR042301 GH115_sf
IPR005154 Glyco_hydro_67_aGlcAse_N
IPR029018 Hex-like_dom2

Pfam protein domain database

More...Pfami		View protein in Pfam
PF17829 GH115_C, 1 hit
PF15979 Glyco_hydro_115, 1 hit
PF03648 Glyco_hydro_67N, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF55545 SSF55545, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

C6X167-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MMRCNLKKII IAAVLVFSFE LNAAEPFIVT TKSESTVVLK DASVKLAIYY 
        60         70         80         90        100
DSNIDKGVLR AVNNLRSDLH KVTRDLPAFV TGFSAEKNSL IIIGTIGTNS 
       110        120        130        140        150
VVDNLAKQKK INSKELLGKR EKYLITNITT AEGVEAVLIA GSDKRGTIYG 
       160        170        180        190        200
IYEFSRQIGV SPWHYWADVP VKKSEKLYFK KGVYTDGEPA VELRGIFLND 
       210        220        230        240        250
EEPALGGWAR ATFGGFNSKF YEKVFELVLR LKGNYMWPAM WGSAFYDDDV 
       260        270        280        290        300
LNGPLADEMG IVMGTSHHEP MALAQQDWRR YIKKNNLPNV WDFNKNSKVL 
       310        320        330        340        350
NEFWAEGIKR SNNWERLVTV GMRGDGDEAM EDGTNISLLE NIVKNQRAII 
       360        370        380        390        400
EKATGRKAAK TPQVWALYKE VQDYYDAGMR VPEDVILLFA DDNWGNVRKL 
       410        420        430        440        450
PDLSKPLHKG GYGMYYHFDY VGAPRNAKWI NISPIQRIWE QMNLTYEHEV 
       460        470        480        490        500
KKLWVVNVGD LKPMEFPMSF FMDMAWNPKN FNADNLMQYT ENWAAAQFGD 
       510        520        530        540        550
KHSKEIARLI NLYSKYNRRV TPEMLDDKTY SLENYNEFET VVNEYRALAL 
       560        570        580        590        600
DANRLYNDIP AEYKDAYFQL VLYPVDASSN LYEMYFNIAM NKKLAAENNP 
       610        620        630        640        650
DANRYADLAK QKFEYDTQLA QKYNTEIAGG KWPHMMDQIH IGYKIWQQPD 
       660        670        680        690        700
KNIMPEVKYV EENLNRKSKV FIENDGYVSI EAENFARAAG SSKIQWKVIP 
       710        720        730        740        750
DFGKTKSGLT TLPQNAYPTS KDNIAVEYDI DFTSTGTFDV ELLLAPTLNF 
       760        770        780        790        800
NHNKGLRYEI SLNGKNPQTI NFNGHYKGEL AQWQAEHIIR SVSKITVDQP 
       810        820        830 
GTHILKIKVL EPGIVFEKIL INTGGLKPSY LGAPESNYR
Length:839
Mass (Da):95,894
Last modified:September 22, 2009 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i220D963782D4BF9A
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
CP001673 Genomic DNA Translation: ACU08180.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...EnsemblBacteriai		ACU08180; ACU08180; FIC_01737

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		fba:FIC_01737

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001673 Genomic DNA Translation: ACU08180.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein-protein interaction databases

STRINGi531844.FIC_01737

Protein family/group databases

CAZyiGH115 Glycoside Hydrolase Family 115

Genome annotation databases

EnsemblBacteriaiACU08180; ACU08180; FIC_01737
KEGGifba:FIC_01737

Phylogenomic databases

eggNOGiENOG4105CVY Bacteria
ENOG410XNPT LUCA
HOGENOMiHOG000180457
OMAiDQTHIGY
OrthoDBi166825at2

Enzyme and pathway databases

BioCyciFBAC531844:G1GFD-1721-MONOMER

Family and domain databases

Gene3Di3.20.20.520, 1 hit
3.30.379.10, 1 hit
InterProiView protein in InterPro
IPR031924 GH115
IPR041437 GH115_C
IPR042301 GH115_sf
IPR005154 Glyco_hydro_67_aGlcAse_N
IPR029018 Hex-like_dom2
PfamiView protein in Pfam
PF17829 GH115_C, 1 hit
PF15979 Glyco_hydro_115, 1 hit
PF03648 Glyco_hydro_67N, 1 hit
SUPFAMiSSF55545 SSF55545, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiC6X167_FLAB3
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: C6X167
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: November 13, 2019
This is version 49 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health

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