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Protein
Submitted name:

Ricin B lectin

Gene

Amir_4151

Organism
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandLectinImported

Protein family/group databases

CAZyiCBM13 Carbohydrate-Binding Module Family 13

Names & Taxonomyi

Protein namesi
Submitted name:
Ricin B lectinImported
Gene namesi
Ordered Locus Names:Amir_4151Imported
OrganismiActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)Imported
Taxonomic identifieri446462 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPseudonocardialesPseudonocardiaceaeActinosynnema
Proteomesi
  • UP000002213 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500296990224 – 320Sequence analysisAdd BLAST297

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini192 – 319Ricin B-type lectinInterPro annotationAdd BLAST128

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000097216
OrthoDBiPOG091H17DI

Family and domain databases

CDDicd00161 RICIN, 1 hit
Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR013783 Ig-like_fold
IPR035992 Ricin_B-like_lectins
IPR000772 Ricin_B_lectin
IPR033764 Sdr_B
PfamiView protein in Pfam
PF00652 Ricin_B_lectin, 1 hit
PF17210 SdrD_B, 1 hit
SMARTiView protein in SMART
SM00458 RICIN, 1 hit
SUPFAMiSSF50370 SSF50370, 1 hit
PROSITEiView protein in PROSITE
PS50231 RICIN_B_LECTIN, 1 hit

Sequencei

Sequence statusi: Complete.

C6WH87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRWLSVACA IALLPLGAPG ASAAEPDMSA PERAVPEKTG VIVDGGSGNR
60 70 80 90 100
ASLGATSTGN TVAGRVWNDD GDGVRQDHES AAQLEIRLWT HHPTAGWSAV
110 120 130 140 150
RVTSYGGAYA FTDVPPGSYQ VQVWVPASSP EAVTRFGAGG DRQRDSDVLG
160 170 180 190 200
PNAESLPVVF ADGGPETRGV DAGLVPGRST GNSVKSAANH WCLDQEAPNG
210 220 230 240 250
LPPTAGVGAY RCHGDRNQKW YFYWITTEVV EVWGGWNWDC LDQEFPGDQK
260 270 280 290 300
TSEVGVHPCH GGVNQRWRVY HNELQGEPMT VANVRTGECL DQESPQGPPT
310 320
SGVGVHACHG GLNQKWYVAD
Length:320
Mass (Da):34,079
Last modified:September 22, 2009 - v1
Checksum:i63C93F0AE61216D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001630 Genomic DNA Translation: ACU38006.1

Genome annotation databases

EnsemblBacteriaiACU38006; ACU38006; Amir_4151
KEGGiami:Amir_4151

Similar proteinsi

Entry informationi

Entry nameiC6WH87_ACTMD
AccessioniPrimary (citable) accession number: C6WH87
Entry historyiIntegrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: February 28, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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