Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ricin B lectin

Gene

Amir_3927

Organism
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
LigandLectinImported

Protein family/group databases

CAZyiCBM13 Carbohydrate-Binding Module Family 13
GH43 Glycoside Hydrolase Family 43

Names & Taxonomyi

Protein namesi
Submitted name:
Ricin B lectinImported
Gene namesi
Ordered Locus Names:Amir_3927Imported
OrganismiActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)Imported
Taxonomic identifieri446462 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPseudonocardialesPseudonocardiaceaeActinosynnema
Proteomesi
  • UP000002213 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 34Sequence analysisAdd BLAST34
ChainiPRO_500297258435 – 436Sequence analysisAdd BLAST402

Interactioni

Protein-protein interaction databases

STRINGi446462.Amir_3927

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini297 – 434Ricin B-type lectinInterPro annotationAdd BLAST138

Sequence similaritiesi

Belongs to the glycosyl hydrolase 43 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4108M7C Bacteria
ENOG410ZHNC LUCA
OrthoDBiPOG091H0XZ1

Family and domain databases

CDDicd00161 RICIN, 1 hit
Gene3Di2.115.10.20, 1 hit
InterProiView protein in InterPro
IPR006710 Glyco_hydro_43
IPR023296 Glyco_hydro_beta-prop_sf
IPR035992 Ricin_B-like_lectins
IPR000772 Ricin_B_lectin
PfamiView protein in Pfam
PF04616 Glyco_hydro_43, 1 hit
PF14200 RicinB_lectin_2, 2 hits
SMARTiView protein in SMART
SM00458 RICIN, 1 hit
SUPFAMiSSF50370 SSF50370, 1 hit
SSF75005 SSF75005, 1 hit
PROSITEiView protein in PROSITE
PS50231 RICIN_B_LECTIN, 1 hit

Sequencei

Sequence statusi: Complete.

C6WEJ7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MHRPPTFARR LARLCLALLT AAATAVAVAP PAQAAAGYLY TTFKGDGAAD
60 70 80 90 100
QELWVYSSTN GTSFSAFADT NYRGPSGVLR DPSVIRHNGL YYVAHTVQSW
110 120 130 140 150
TTNSTYFNIA SSPDLLTWTH VASVNSGIAN TRFTWAPEFY VENGVVRIIV
160 170 180 190 200
SVDQTTCSNC FRPYVFTAQN AALTSWSAPV QMSGLGANHI DTYVVKSGSA
210 220 230 240 250
YHAFTKNETT KYIEHWVGTS LTGGWTLRGQ LWTSGHEGPA VLRMADGTWR
260 270 280 290 300
IWVDKYTNGG MWTATSADLD SWSGLGQVAC AGCRHGTVLA VADLPSPAAA
310 320 330 340 350
YRVDNRNSGR SLDVVSASTA DNAEVKQWAW NGGDNQRWEF RDTGDGYSRI
360 370 380 390 400
VNRNSGKCLD VAGASTADGA NVIQYACGSG ANQQWQWQAS GSHFRIVARH
410 420 430
SGKCLDVVGS GLQDGADVQQ LTCGSGANQQ WGRAQT
Length:436
Mass (Da):46,910
Last modified:September 22, 2009 - v1
Checksum:i9BD7C6501F7E3415
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001630 Genomic DNA Translation: ACU37797.1

Genome annotation databases

EnsemblBacteriaiACU37797; ACU37797; Amir_3927
KEGGiami:Amir_3927

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001630 Genomic DNA Translation: ACU37797.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi446462.Amir_3927

Protein family/group databases

CAZyiCBM13 Carbohydrate-Binding Module Family 13
GH43 Glycoside Hydrolase Family 43

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU37797; ACU37797; Amir_3927
KEGGiami:Amir_3927

Phylogenomic databases

eggNOGiENOG4108M7C Bacteria
ENOG410ZHNC LUCA
OrthoDBiPOG091H0XZ1

Family and domain databases

CDDicd00161 RICIN, 1 hit
Gene3Di2.115.10.20, 1 hit
InterProiView protein in InterPro
IPR006710 Glyco_hydro_43
IPR023296 Glyco_hydro_beta-prop_sf
IPR035992 Ricin_B-like_lectins
IPR000772 Ricin_B_lectin
PfamiView protein in Pfam
PF04616 Glyco_hydro_43, 1 hit
PF14200 RicinB_lectin_2, 2 hits
SMARTiView protein in SMART
SM00458 RICIN, 1 hit
SUPFAMiSSF50370 SSF50370, 1 hit
SSF75005 SSF75005, 1 hit
PROSITEiView protein in PROSITE
PS50231 RICIN_B_LECTIN, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiC6WEJ7_ACTMD
AccessioniPrimary (citable) accession number: C6WEJ7
Entry historyiIntegrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: February 28, 2018
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again