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Protein
Submitted name:

Ricin B lectin

Gene

Amir_1850

Organism
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandLectinImported

Protein family/group databases

CAZyiCBM13 Carbohydrate-Binding Module Family 13

Names & Taxonomyi

Protein namesi
Submitted name:
Ricin B lectinImported
Gene namesi
Ordered Locus Names:Amir_1850Imported
OrganismiActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)Imported
Taxonomic identifieri446462 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPseudonocardialesPseudonocardiaceaeActinosynnema
Proteomesi
  • UP000002213 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500297276227 – 496Sequence analysisAdd BLAST470

Interactioni

Protein-protein interaction databases

STRINGi446462.Amir_1850

Structurei

3D structure databases

ProteinModelPortaliC6WE55
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini370 – 496Ricin B-type lectinInterPro annotationAdd BLAST127

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4106T9R Bacteria
ENOG410XQ6H LUCA
HOGENOMiHOG000253137
OMAiRTTGWRC
OrthoDBiPOG091H09TO

Family and domain databases

CDDicd00161 RICIN, 1 hit
Gene3Di3.30.300.50, 2 hits
InterProiView protein in InterPro
IPR004236 Pept_S1_alpha_lytic
IPR001316 Pept_S1A_streptogrisin
IPR009003 Peptidase_S1_PA
IPR035992 Ricin_B-like_lectins
IPR000772 Ricin_B_lectin
IPR035070 Streptogrisin_prodomain
PfamiView protein in Pfam
PF02983 Pro_Al_protease, 1 hit
PF00652 Ricin_B_lectin, 1 hit
PRINTSiPR00861 ALYTICPTASE
SMARTiView protein in SMART
SM00458 RICIN, 1 hit
SUPFAMiSSF50370 SSF50370, 1 hit
SSF50494 SSF50494, 1 hit
PROSITEiView protein in PROSITE
PS50231 RICIN_B_LECTIN, 1 hit

Sequencei

Sequence statusi: Complete.

C6WE55-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRLIAQCCAA VMTAALITLP AAAAQAEPAA TPDSATLPEA LKRDLDITPA
60 70 80 90 100
EATARQQKEQ AGVPVAEELR TELDGRFGGS WFDKGKLKVG VTDDAAAKAV
110 120 130 140 150
RDKGAEPVPV ARSEKALDDT KSALDGARNG TEAVHSWYVD PTSNTVVVTA
160 170 180 190 200
ASEQAGREFA AKAGVEGSVR VTTGHEMKPA HDLRGGDQYV INGNTLCSVG
210 220 230 240 250
FPVNGGFVTA GHCGGTGSTT KGFNNVNQGT FAGSSFPGQD YAWVRTNGDW
260 270 280 290 300
ASKPWVNNYS GGNVVVAGSQ EAGVGATICR SGRTTGWRCG TIQAKNVTVN
310 320 330 340 350
YGGRIVNGLV STTACAEGGD SGGAVLSGNQ AQGVTSGAGG NCSNGGTSVY
360 370 380 390 400
QPLKPILSAY GLTLTTNGGG GSGTKIIGHQ NRCVDVPNSN AKDGQRLQVW
410 420 430 440 450
DCNGTNAQNW TFAGDGTVRA FGMCMDVAWG SRDNGAAIQL ATCSGNPAQQ
460 470 480 490
FVLSGAGDLV NPQANKCVDI TGSWGSGSAL QQWECTGKSN QKWRKG
Length:496
Mass (Da):50,901
Last modified:September 22, 2009 - v1
Checksum:i081298E68EC9EEDD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001630 Genomic DNA Translation: ACU35798.1

Genome annotation databases

EnsemblBacteriaiACU35798; ACU35798; Amir_1850
KEGGiami:Amir_1850

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001630 Genomic DNA Translation: ACU35798.1

3D structure databases

ProteinModelPortaliC6WE55
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi446462.Amir_1850

Protein family/group databases

CAZyiCBM13 Carbohydrate-Binding Module Family 13

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU35798; ACU35798; Amir_1850
KEGGiami:Amir_1850

Phylogenomic databases

eggNOGiENOG4106T9R Bacteria
ENOG410XQ6H LUCA
HOGENOMiHOG000253137
OMAiRTTGWRC
OrthoDBiPOG091H09TO

Family and domain databases

CDDicd00161 RICIN, 1 hit
Gene3Di3.30.300.50, 2 hits
InterProiView protein in InterPro
IPR004236 Pept_S1_alpha_lytic
IPR001316 Pept_S1A_streptogrisin
IPR009003 Peptidase_S1_PA
IPR035992 Ricin_B-like_lectins
IPR000772 Ricin_B_lectin
IPR035070 Streptogrisin_prodomain
PfamiView protein in Pfam
PF02983 Pro_Al_protease, 1 hit
PF00652 Ricin_B_lectin, 1 hit
PRINTSiPR00861 ALYTICPTASE
SMARTiView protein in SMART
SM00458 RICIN, 1 hit
SUPFAMiSSF50370 SSF50370, 1 hit
SSF50494 SSF50494, 1 hit
PROSITEiView protein in PROSITE
PS50231 RICIN_B_LECTIN, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiC6WE55_ACTMD
AccessioniPrimary (citable) accession number: C6WE55
Entry historyiIntegrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: October 25, 2017
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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