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Protein
Submitted name:

C-type LECtin

Gene

clec-199

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandLectinImported

Names & Taxonomyi

Protein namesi
Submitted name:
C-type LECtinImported
Gene namesi
Name:clec-199Imported
ORF Names:C30H6.1Imported, CELE_C30H6.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiC30H6.1a ; CE43849 ; WBGene00007820 ; clec-199

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500296728921 – 657Sequence analysisAdd BLAST637

Expressioni

Gene expression databases

BgeeiWBGene00007820 Expressed in 3 organ(s), highest expression level in multi-cellular organism

Structurei

3D structure databases

ProteinModelPortaliC6KRM5
SMRiC6KRM5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini108 – 231C-type lectinInterPro annotationAdd BLAST124

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG4297 Eukaryota
ENOG410XPJ1 LUCA
GeneTreeiENSGT00730000112063
HOGENOMiHOG000016005

Family and domain databases

Gene3Di3.10.100.10, 2 hits
InterProiView protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR016187 CTDL_fold
PfamiView protein in Pfam
PF00059 Lectin_C, 1 hit
SMARTiView protein in SMART
SM00034 CLECT, 2 hits
SUPFAMiSSF56436 SSF56436, 2 hits
PROSITEiView protein in PROSITE
PS50041 C_TYPE_LECTIN_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 15 potential isoforms that are computationally mapped.Show allAlign All

C6KRM5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNRFFCLTVL FSYLYRFTFS ANDNAKIDNL VARQYLFSNF VANNREALKK
60 70 80 90 100
SDGSDERWLF KFMNENSIIP PTSNSKSGSL ADSGQAGLVL ADAIGTAKCA
110 120 130 140 150
SGWTRWTGNG CCYKEMASPM LSWYASEDWC YSQKAGAHLA SVHSRAEAEW
160 170 180 190 200
LNYQYKLWWS KMDDWIGLRR NCDNTAWAWT DGTPVDFLWW QPNYPIYGGI
210 220 230 240 250
EDSCTAMWDS TVLRGMYDFY PGQMDDGRSC TGSVAWALCK YDPNTSIISP
260 270 280 290 300
KWVKADCTTT STTTTSTTTT TTPTTPTTTT TTPTTTTTTP TTTTTTPTTT
310 320 330 340 350
TETTTTPTTE TTTTPTTTTP TTTTTTPTTT TTETTTTPTT TTTETTTTPT
360 370 380 390 400
TTTTTPTTTT TETTTTTPTT TTTTPTTTTT TPTTTTTTPT TTTTTPTTTT
410 420 430 440 450
TAPTTTTTTP TTTTTTPTTT TTVPTTTTTT PTTTTTTTTT PTTTTTTPTT
460 470 480 490 500
TTTPATTTSE TTTTTPTTTT QTTTKPTTTT TTPTTTPTTT TTPTTTTTTA
510 520 530 540 550
KTTKSTTTTT KTTKTTSTPT TTTTTPKTPF DTSKCTVMCS TGWVYYNNLC
560 570 580 590 600
YAKLQGPGRL NDFNKECISY GGKIAEIPDA QVNDVLRKSF GTNINDEEAW
610 620 630 640 650
VISSGYNNVA SGYTAAADSC IAMTLSQKIS GSVAQRGTWR PYACSLAKNF

GICQKPI
Length:657
Mass (Da):70,770
Last modified:September 1, 2009 - v1
Checksum:i9BEACDAC1A484127
GO

Computationally mapped potential isoform sequencesi

There are 15 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
D3KFV8D3KFV8_CAEEL
C-type LECtin
clec-199 C30H6.1, CELE_C30H6.1
667Annotation score:
H2L2E0H2L2E0_CAEEL
C-type LECtin
clec-199 C30H6.1, CELE_C30H6.1
642Annotation score:
C6KRM6C6KRM6_CAEEL
C-type LECtin
clec-199 C30H6.1, CELE_C30H6.1
643Annotation score:
D3KFV9D3KFV9_CAEEL
C-type LECtin
clec-199 C30H6.1, CELE_C30H6.1
653Annotation score:
A0A0K3AS16A0A0K3AS16_CAEEL
C-type LECtin
clec-199 C30H6.1, CELE_C30H6.1
619Annotation score:
A0A0K3AS08A0A0K3AS08_CAEEL
C-type LECtin
clec-199 C30H6.1, CELE_C30H6.1
656Annotation score:
A0A0K3AV02A0A0K3AV02_CAEEL
C-type LECtin
clec-199 C30H6.1, CELE_C30H6.1
643Annotation score:
A0A0K3AUD0A0A0K3AUD0_CAEEL
C-type LECtin
clec-199 C30H6.1, CELE_C30H6.1
632Annotation score:
A0A0K3ARH0A0A0K3ARH0_CAEEL
C-type LECtin
clec-199 C30H6.1, CELE_C30H6.1
640Annotation score:
A0A0K3AXC6A0A0K3AXC6_CAEEL
C-type LECtin
clec-199 C30H6.1, CELE_C30H6.1
633Annotation score:
There are more potential isoformsShow all

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA Translation: CAZ65473.1
RefSeqiNP_001255946.1, NM_001269017.1
UniGeneiCel.25963

Genome annotation databases

EnsemblMetazoaiC30H6.1a; C30H6.1a; WBGene00007820
GeneIDi183064

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA Translation: CAZ65473.1
RefSeqiNP_001255946.1, NM_001269017.1
UniGeneiCel.25963

3D structure databases

ProteinModelPortaliC6KRM5
SMRiC6KRM5
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC30H6.1a; C30H6.1a; WBGene00007820
GeneIDi183064

Organism-specific databases

CTDi183064
WormBaseiC30H6.1a ; CE43849 ; WBGene00007820 ; clec-199

Phylogenomic databases

eggNOGiKOG4297 Eukaryota
ENOG410XPJ1 LUCA
GeneTreeiENSGT00730000112063
HOGENOMiHOG000016005

Gene expression databases

BgeeiWBGene00007820 Expressed in 3 organ(s), highest expression level in multi-cellular organism

Family and domain databases

Gene3Di3.10.100.10, 2 hits
InterProiView protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR016187 CTDL_fold
PfamiView protein in Pfam
PF00059 Lectin_C, 1 hit
SMARTiView protein in SMART
SM00034 CLECT, 2 hits
SUPFAMiSSF56436 SSF56436, 2 hits
PROSITEiView protein in PROSITE
PS50041 C_TYPE_LECTIN_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiC6KRM5_CAEEL
AccessioniPrimary (citable) accession number: C6KRM5
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 7, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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