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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Rpic12D_1408

Organism
Ralstonia pickettii (strain 12D)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Enzyme and pathway databases

BioCyciRPIC428406:GH9Y-1405-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Rpic12D_1408Imported
OrganismiRalstonia pickettii (strain 12D)Imported
Taxonomic identifieri428406 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia
Proteomesi
  • UP000008208 Componenti: Chromosome 1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 33HelicalSequence analysisAdd BLAST22
Transmembranei189 – 210HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliC6BHT9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini211 – 263HAMPInterPro annotationAdd BLAST53
Domaini268 – 497Methyl-accepting transducerInterPro annotationAdd BLAST230

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili287 – 307Sequence analysisAdd BLAST21
Coiled coili398 – 418Sequence analysisAdd BLAST21
Coiled coili475 – 513Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000148074
KOiK03406
OMAiMTSIVRQ
OrthoDBiPOG091H0QRR

Family and domain databases

CDDicd06225 HAMP, 1 hit
cd00181 Tar_Tsr_LBD, 1 hit
InterProiView protein in InterPro
IPR035440 4HB_MCP_dom_sf
IPR004090 Chemotax_Me-accpt_rcpt
IPR003660 HAMP_dom
IPR004089 MCPsignal_dom
IPR003122 Tar_rcpt_lig-bd
PfamiView protein in Pfam
PF00672 HAMP, 1 hit
PF00015 MCPsignal, 1 hit
PF02203 TarH, 1 hit
PRINTSiPR00260 CHEMTRNSDUCR
SMARTiView protein in SMART
SM00304 HAMP, 1 hit
SM00283 MA, 1 hit
SUPFAMiSSF47170 SSF47170, 1 hit
PROSITEiView protein in PROSITE
PS50111 CHEMOTAXIS_TRANSDUC_2, 1 hit
PS50885 HAMP, 1 hit

Sequencei

Sequence statusi: Complete.

C6BHT9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSARLTIRTR LVLSVSILFL LALLIGVAGL LGLRDANRAH EQTFTNQFPS
60 70 80 90 100
ALALGESDLS LTRARTALDK AMLYPEDKGA MQLLDRTEEL IARSDEAWKK
110 120 130 140 150
YLALPRDDEE ERLAKEVATK REAASATLRD IIKALRAGDR ATADKIMEKG
160 170 180 190 200
VSKAFRDAND SSLALSKKQL AFSKANYDAS RDAYARFRLI VAAAIVIALG
210 220 230 240 250
AALWCAWSLL RAIVGPLNAA LAQFDRIAAG DLTERVRIDR HDEMGRLLEG
260 270 280 290 300
LARMQTALTD TVRRVRTGSE SIGAATKQIA AGNADLSQRT EEQASSLEET
310 320 330 340 350
ASSMEEMTSI VRQNADNARQ ASQLADSASE VASQGGAVVT DVVATMREIS
360 370 380 390 400
ASSRTVSEII GVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVAGEVRN
410 420 430 440 450
LAQRSAAAAK EIKEMIEASL SKVETGSALA ERAGGTMEDI VSSIRRVTDI
460 470 480 490 500
MGEIAAASNE QSSGIEQVNK AVTLMDEATQ QNAALVEQAA AAAESLEEQA
510
QALNAAIAAF RLA
Length:513
Mass (Da):54,646
Last modified:September 1, 2009 - v1
Checksum:i33C57566DE15BF05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001644 Genomic DNA Translation: ACS62696.1
RefSeqiWP_012761948.1, NC_012856.1

Genome annotation databases

EnsemblBacteriaiACS62696; ACS62696; Rpic12D_1408
KEGGirpf:Rpic12D_1408

Similar proteinsi

Entry informationi

Entry nameiC6BHT9_RALP1
AccessioniPrimary (citable) accession number: C6BHT9
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: June 20, 2018
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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