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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3009G120800

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Calcium bindingi60 – 71PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi96 – 107PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi134 – 145PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi170 – 181PROSITE-ProRule annotationAdd BLAST12

GO - Molecular functioni

Keywordsi

LigandCalciumPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3009G120800Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 9

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb09g018860.1

Structurei

3D structure databases

ProteinModelPortaliC5YXC5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini47 – 82EF-handInterPro annotationAdd BLAST36
Domaini83 – 118EF-handInterPro annotationAdd BLAST36
Domaini121 – 156EF-handInterPro annotationAdd BLAST36
Domaini157 – 192EF-handInterPro annotationAdd BLAST36

Phylogenomic databases

eggNOGiKOG0027 Eukaryota
COG5126 LUCA
HOGENOMiHOG000233018
InParanoidiC5YXC5
KOiK13448
OrthoDBiEOG09360QFU

Family and domain databases

CDDicd00051 EFh, 2 hits
InterProiView protein in InterPro
IPR011992 EF-hand-dom_pair
IPR018247 EF_Hand_1_Ca_BS
IPR002048 EF_hand_dom
IPR039647 EF_hand_pair_protein_CML-like
PANTHERiPTHR10891 PTHR10891, 1 hit
PfamiView protein in Pfam
PF13499 EF-hand_7, 2 hits
SMARTiView protein in SMART
SM00054 EFh, 4 hits
SUPFAMiSSF47473 SSF47473, 1 hit
PROSITEiView protein in PROSITE
PS00018 EF_HAND_1, 4 hits
PS50222 EF_HAND_2, 4 hits

Sequencei

Sequence statusi: Complete.

C5YXC5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGKVRSFFSR SRSGGSKRGA AGAPGASSPF SSAPPSPLPR RSPSAARAAD
60 70 80 90 100
ETERVFRKFD ANGDGQISRC ELAALFASVG HAATDDEVSR MMEEADADGD
110 120 130 140 150
GCISLTEFAA LMDAASADAA AVEEDLRHAF MVFDADGNGL ITPAELARVM
160 170 180 190
RGLGESATVA QCRRMIQGVD RNGDGLVSFD EFKLMMAAGG GGFGRIGAA
Length:199
Mass (Da):20,586
Last modified:September 1, 2009 - v1
Checksum:i71679399AE7DFFEB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000768 Genomic DNA Translation: EES19444.1
RefSeqiXP_002441014.1, XM_002440969.1

Genome annotation databases

EnsemblPlantsiEES19444; EES19444; SORBI_3009G120800
GeneIDi8076822
GrameneiEES19444; EES19444; SORBI_3009G120800
KEGGisbi:8076822

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000768 Genomic DNA Translation: EES19444.1
RefSeqiXP_002441014.1, XM_002440969.1

3D structure databases

ProteinModelPortaliC5YXC5
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb09g018860.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEES19444; EES19444; SORBI_3009G120800
GeneIDi8076822
GrameneiEES19444; EES19444; SORBI_3009G120800
KEGGisbi:8076822

Phylogenomic databases

eggNOGiKOG0027 Eukaryota
COG5126 LUCA
HOGENOMiHOG000233018
InParanoidiC5YXC5
KOiK13448
OrthoDBiEOG09360QFU

Family and domain databases

CDDicd00051 EFh, 2 hits
InterProiView protein in InterPro
IPR011992 EF-hand-dom_pair
IPR018247 EF_Hand_1_Ca_BS
IPR002048 EF_hand_dom
IPR039647 EF_hand_pair_protein_CML-like
PANTHERiPTHR10891 PTHR10891, 1 hit
PfamiView protein in Pfam
PF13499 EF-hand_7, 2 hits
SMARTiView protein in SMART
SM00054 EFh, 4 hits
SUPFAMiSSF47473 SSF47473, 1 hit
PROSITEiView protein in PROSITE
PS00018 EF_HAND_1, 4 hits
PS50222 EF_HAND_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiC5YXC5_SORBI
AccessioniPrimary (citable) accession number: C5YXC5
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 7, 2018
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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