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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3009G250900

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

Mg2+SAAS annotation

GO - Molecular functioni

Keywordsi

Molecular functionHydrolase, Protein phosphataseUniRule annotationSAAS annotation
LigandMagnesiumSAAS annotation, Metal-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3009G250900Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 9

Expressioni

Gene expression databases

ExpressionAtlasiC5YWL8 baseline

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb09g030150.1

Structurei

3D structure databases

ProteinModelPortaliC5YWL8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini257 – 503PPM-type phosphataseInterPro annotationAdd BLAST247

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili93 – 113Sequence analysisAdd BLAST21
Coiled coili218 – 238Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the PP2C family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0698 Eukaryota
COG0631 LUCA
HOGENOMiHOG000233896
InParanoidiC5YWL8
KOiK17506
OMAiRAGGKMM
OrthoDBiEOG09360FJK

Family and domain databases

CDDicd00143 PP2Cc, 1 hit
Gene3Di3.60.40.10, 1 hit
InterProiView protein in InterPro
IPR015655 PP2C
IPR000222 PP2C_BS
IPR036457 PPM-type_dom_sf
IPR001932 PPM-type_phosphatase_dom
PANTHERiPTHR13832 PTHR13832, 1 hit
PfamiView protein in Pfam
PF00481 PP2C, 1 hit
SMARTiView protein in SMART
SM00331 PP2C_SIG, 1 hit
SM00332 PP2Cc, 1 hit
SUPFAMiSSF81606 SSF81606, 1 hit
PROSITEiView protein in PROSITE
PS01032 PPM_1, 1 hit
PS51746 PPM_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.iShow all

C5YWL8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVCDGAVKDQ DQETAAASTA SAASVVAASE ASPAPVVVVV SARPSARSSP
60 70 80 90 100
HDKRLGVRHP LKHRRFRAGG KMMVEPGGVP PAHAVPEGEE EEEEEEEGAS
110 120 130 140 150
EVEEEELVEA EAEQASSAGT AMRGTEVEVS SAPAAGVQEM EVEVEGGEME
160 170 180 190 200
VKYGEMEVSP EPAVAVGGTE LEAHPDEEDE VSSISVARGE KKQEAASPPP
210 220 230 240 250
AASAVLAVEA PREMGQYGER AEKERRDKER ERQKERERVD EVGYMSGGWK
260 270 280 290 300
SVDGTLNCGY SSFRGKRASM EDFYDIKSSK IDDKQINLFG IFDGHGGSRA
310 320 330 340 350
AEYLKEHLFE NLMKHPEFMT NTKLAISETY RKTDSEFLDA ERNTHRDDGS
360 370 380 390 400
TASTAVLVGD HLYVANVGDS RAVISKAGKA IALSEDHKPN RSDERKRIES
410 420 430 440 450
AGGIVMWAGT WRVGGVLAMS RAFGNRLLKQ FVIADPEIQE QEINDELEFL
460 470 480 490 500
IIASDGLWDV VPNEDAVTLV KMEEEPEAAA RKLTETAFSR GSGDNITCIV
510 520
VKFQHDKPGS SGGGDPPSSP PGDKS
Length:525
Mass (Da):56,628
Last modified:September 1, 2009 - v1
Checksum:iD9EF5FEB975FF495
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1Z5R410A0A1Z5R410_SORBI
Uncharacterized protein
SORBI_3009G250900
500Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000768 Genomic DNA Translation: EES20031.1
RefSeqiXP_002441601.1, XM_002441556.1

Genome annotation databases

EnsemblPlantsiEES20031; EES20031; SORBI_3009G250900
GeneIDi8065298
GrameneiEES20031; EES20031; SORBI_3009G250900
KEGGisbi:8065298

Similar proteinsi

Entry informationi

Entry nameiC5YWL8_SORBI
AccessioniPrimary (citable) accession number: C5YWL8
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 23, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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