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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3005G190000

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3005G190000Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 5

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb05g024660.1

Structurei

3D structure databases

ProteinModelPortaliC5Y6G4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 158MATHInterPro annotationAdd BLAST131
Domaini196 – 263BTBInterPro annotationAdd BLAST68

Phylogenomic databases

eggNOGiKOG1987 Eukaryota
ENOG410XQV8 LUCA
HOGENOMiHOG000220920
InParanoidiC5Y6G4
OMAiCEITVPR
OrthoDBiEOG09360BA4

Family and domain databases

CDDicd00121 MATH, 1 hit
cd14736 SPOP_C_like_plant, 1 hit
Gene3Di2.60.210.10, 1 hit
InterProiView protein in InterPro
IPR034090 BPM_C
IPR000210 BTB/POZ_dom
IPR002083 MATH/TRAF_dom
IPR011333 SKP1/BTB/POZ_sf
IPR008974 TRAF-like
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00917 MATH, 1 hit
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SUPFAMiSSF49599 SSF49599, 1 hit
SSF54695 SSF54695, 1 hit
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS50144 MATH, 1 hit

Sequencei

Sequence statusi: Complete.

C5Y6G4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSTAESAVG SGHGEAVTTS AIVAEAVTGS HVLQIKGYSL TKGLGIGKFI
60 70 80 90 100
KSSTFCVCGH RWYIRYYPDG DCLDSADWIS IYLQHDHTDA VDVKARFKFS
110 120 130 140 150
VLDDIGEPVP TFSQKSCMRT FSSSKGGSWG FNKFVARKAL EESSSYLKDD
160 170 180 190 200
CLKVRCDVTV SKEISTEATT TTQCVMVPPS NMHLHFGCLL SGAVGADVTF
210 220 230 240 250
DVAGEMFAAH RCVLAARSSV FKAELFGPMK EKAMNSIRIQ EMEARVFKAM
260 270 280 290 300
LHFIYTDALP FIEKGDVFLI TQHLLVAADR YDLERLKLIC EVKLCKCIDT
310 320 330 340 350
STVAATLVLA ERHGCQGLKK ACFELLKSPV HLKTVMATEG FDHLLTTCPS
360
LIKELLLAKD AATCP
Length:365
Mass (Da):39,940
Last modified:September 1, 2009 - v1
Checksum:i10F580EA64DE5D0A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000764 Genomic DNA Translation: EES08857.1
RefSeqiXP_002449869.1, XM_002449824.1

Genome annotation databases

EnsemblPlantsiEES08857; EES08857; SORBI_3005G190000
GrameneiEES08857; EES08857; SORBI_3005G190000

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000764 Genomic DNA Translation: EES08857.1
RefSeqiXP_002449869.1, XM_002449824.1

3D structure databases

ProteinModelPortaliC5Y6G4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb05g024660.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEES08857; EES08857; SORBI_3005G190000
GrameneiEES08857; EES08857; SORBI_3005G190000

Phylogenomic databases

eggNOGiKOG1987 Eukaryota
ENOG410XQV8 LUCA
HOGENOMiHOG000220920
InParanoidiC5Y6G4
OMAiCEITVPR
OrthoDBiEOG09360BA4

Family and domain databases

CDDicd00121 MATH, 1 hit
cd14736 SPOP_C_like_plant, 1 hit
Gene3Di2.60.210.10, 1 hit
InterProiView protein in InterPro
IPR034090 BPM_C
IPR000210 BTB/POZ_dom
IPR002083 MATH/TRAF_dom
IPR011333 SKP1/BTB/POZ_sf
IPR008974 TRAF-like
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00917 MATH, 1 hit
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SUPFAMiSSF49599 SSF49599, 1 hit
SSF54695 SSF54695, 1 hit
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS50144 MATH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiC5Y6G4_SORBI
AccessioniPrimary (citable) accession number: C5Y6G4
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: February 28, 2018
This is version 48 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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