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Protein

V-type proton ATPase subunit a

Gene

SORBI_3003G346400

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processHydrogen ion transportUniRule annotation, Ion transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
V-type proton ATPase subunit aUniRule annotation
Gene namesi
ORF Names:SORBI_3003G346400Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei422 – 446HelicalUniRule annotationAdd BLAST25
Transmembranei467 – 484HelicalUniRule annotationAdd BLAST18
Transmembranei547 – 565HelicalUniRule annotationAdd BLAST19
Transmembranei585 – 602HelicalUniRule annotationAdd BLAST18
Transmembranei637 – 654HelicalUniRule annotationAdd BLAST18
Transmembranei755 – 776HelicalUniRule annotationAdd BLAST22

Keywords - Cellular componenti

Membrane

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili99 – 126Sequence analysisAdd BLAST28

Sequence similaritiesi

Belongs to the V-ATPase 116 kDa subunit family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiENOG410IKB1 Eukaryota
ENOG410YE21 LUCA
HOGENOMiHOG000238437
InParanoidiC5XP13
OrthoDBiEOG09360DV3

Family and domain databases

InterProiView protein in InterPro
IPR002490 V-ATPase_116kDa_su
IPR026028 V-type_ATPase_116kDa_su_euka
PANTHERiPTHR11629 PTHR11629, 1 hit
PfamiView protein in Pfam
PF01496 V_ATPase_I, 1 hit
PIRSFiPIRSF001293 ATP6V0A1, 1 hit

Sequencei

Sequence statusi: Complete.

C5XP13-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGVFDRLPPM DHMRSEKMCF VQLIMPAESS RLAVTYLGEL GLLQFKDLNE
60 70 80 90 100
DKSPFQRIFV NQVKRCAEMS RKLRFFSDQI NRAGVRSSVR PALEPDIDLE
110 120 130 140 150
ELEARLGEHE HELLEMNTNS DKLQQTYNEL LEFKLVLSKA GGILASSHNH
160 170 180 190 200
AASAERELDE NIDDNGVDEG NAYLLEQGVH QRAHGNSGVR FVSGIILKSK
210 220 230 240 250
ALAFERMLFR ATRGNMLFNQ ASAGEPVTDP ISGEEVEKTV FVVFFSGEQA
260 270 280 290 300
KAKILKICDS FGASCYPVPE EMVKQRQIFN EVSARLSDLE VTLDAGIQHR
310 320 330 340 350
NKALESIGSQ LWRWTIMVKK EKAVYDTLNM LNFDVTKKCL VGEGWCPIFA
360 370 380 390 400
KSQIKDCLQR ATLHSNSQVG TIFHEMDTIE SPPTYFRTDK FTNAFQEIVD
410 420 430 440 450
AYGVARYQEA NPAVYSVVTF PFLFAVMFGD WGHGICLLLG ALVLIVREKR
460 470 480 490 500
LSSQKLSSFM ELAFGGRYVI LLMAIFSIYC GLIYNEFFSV PFHIFGKSAY
510 520 530 540 550
ECRDKSCSDA HTIGLIKVRD PYPFGVDPSW RGSRSELPFL NSLKMKMSIL
560 570 580 590 600
MGVAQMNLGI VLSYFDARFH GNALDIRYQF IPQMIFLNSL FGYLALLILI
610 620 630 640 650
KWCTGSQADL YHVMIYMFLD PAGDLGENQL FWGQKELQIL LLLLALVAVP
660 670 680 690 700
WMLFPKPFIL KKLHKERFQG HTYRFLGTSE MDPDSEPDSA RARHDDFNFS
710 720 730 740 750
EVFVHQMIHS IEFVLGAVSN TASYLRLWAL SLAHSELSTV FYEKLLLLAW
760 770 780 790 800
GYDNLIVKLG GLIVFAFATA FILLMMETLS AFLHALRLHW VEFMNKFYHG
810
DGYKFKPFSF ALLADDED
Length:818
Mass (Da):93,028
Last modified:November 2, 2016 - v2
Checksum:i93F8A480BEABEEE5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000762 Genomic DNA Translation: EES03840.2

Genome annotation databases

EnsemblPlantsiEES03840; EES03840; SORBI_3003G346400
GrameneiEES03840; EES03840; SORBI_3003G346400

Similar proteinsi

Entry informationi

Entry nameiC5XP13_SORBI
AccessioniPrimary (citable) accession number: C5XP13
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: November 2, 2016
Last modified: April 25, 2018
This is version 38 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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