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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3003G128300

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei217Glycyl thioester intermediatePROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3003G128300Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 3

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb03g010860.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini350 – 441E2_bindInterPro annotationAdd BLAST92

Phylogenomic databases

eggNOGiKOG2015 Eukaryota
COG0476 LUCA
HOGENOMiHOG000166793
InParanoidiC5XH65
KOiK10686
OMAiTAFPICT
OrthoDBiEOG09360EWD

Family and domain databases

Gene3Di1.10.10.520, 1 hit
InterProiView protein in InterPro
IPR014929 E2_binding
IPR000594 ThiF_NAD_FAD-bd
IPR023318 Ub_act_enz_dom_a_sf
IPR030468 Uba3
IPR035985 Ubiquitin-activating_enz
IPR033127 UBQ-activ_enz_E1_Cys_AS
PANTHERiPTHR10953:SF6 PTHR10953:SF6, 1 hit
PfamiView protein in Pfam
PF08825 E2_bind, 1 hit
PF00899 ThiF, 1 hit
SMARTiView protein in SMART
SM01181 E2_bind, 1 hit
SUPFAMiSSF69572 SSF69572, 1 hit
PROSITEiView protein in PROSITE
PS00865 UBIQUITIN_ACTIVAT_2, 1 hit

Sequencei

Sequence statusi: Complete.

C5XH65-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASPDAEQPA PTEPERWRDL DMLLSRPGNL VEASFDPSPG LRDLLGSLVE
60 70 80 90 100
VLVVGAGGLG CELLKDLALS GFKKLHVIDM DTIDVSNLNR QFLFRVQDVG
110 120 130 140 150
KSKAEVAAKR VMERVNGVNI VPHFCRIEDK EIEFYSQFHI IVLGLDSIEA
160 170 180 190 200
RSYINSVACG FLEYDSNDNP LEETVKPMVD GGTEGFKGHA RVIIPGKTPC
210 220 230 240 250
FECNIWLFPP QVKFPLCTLA ETPRTAAHCI EYAHLIKWDE VHPGKPFDAD
260 270 280 290 300
DAEHMQWIYS EALKRAELFG ISGVTYSLTQ GVVKNIIPAI ASTNAIISAA
310 320 330 340 350
CALEAFKLIS GCSKSVSNYL TYNGLEGTHI KVTEFIRDKD CLVCGPGTLI
360 370 380 390 400
ELDTTSTLSD FIKMLEEHPT LRMSKASVTH EGNNLYMQSP EVLEQMTRPN
410 420 430 440 450
LSVPMFELLK EVPYTTVHAT GMAENNGKKV SSLRKLRVAF KGIEEASKMD

TTVSS
Length:455
Mass (Da):50,229
Last modified:September 1, 2009 - v1
Checksum:iCEEA46A1A53E3713
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000762 Genomic DNA Translation: EES02756.1
RefSeqiXP_002457636.1, XM_002457591.1

Genome annotation databases

EnsemblPlantsiEES02756; EES02756; SORBI_3003G128300
GeneIDi8074525
GrameneiEES02756; EES02756; SORBI_3003G128300
KEGGisbi:8074525

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000762 Genomic DNA Translation: EES02756.1
RefSeqiXP_002457636.1, XM_002457591.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb03g010860.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEES02756; EES02756; SORBI_3003G128300
GeneIDi8074525
GrameneiEES02756; EES02756; SORBI_3003G128300
KEGGisbi:8074525

Phylogenomic databases

eggNOGiKOG2015 Eukaryota
COG0476 LUCA
HOGENOMiHOG000166793
InParanoidiC5XH65
KOiK10686
OMAiTAFPICT
OrthoDBiEOG09360EWD

Family and domain databases

Gene3Di1.10.10.520, 1 hit
InterProiView protein in InterPro
IPR014929 E2_binding
IPR000594 ThiF_NAD_FAD-bd
IPR023318 Ub_act_enz_dom_a_sf
IPR030468 Uba3
IPR035985 Ubiquitin-activating_enz
IPR033127 UBQ-activ_enz_E1_Cys_AS
PANTHERiPTHR10953:SF6 PTHR10953:SF6, 1 hit
PfamiView protein in Pfam
PF08825 E2_bind, 1 hit
PF00899 ThiF, 1 hit
SMARTiView protein in SMART
SM01181 E2_bind, 1 hit
SUPFAMiSSF69572 SSF69572, 1 hit
PROSITEiView protein in PROSITE
PS00865 UBIQUITIN_ACTIVAT_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiC5XH65_SORBI
AccessioniPrimary (citable) accession number: C5XH65
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 7, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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