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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3003G243700

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3003G243700Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb03g030020.1

Family & Domainsi

Phylogenomic databases

eggNOGiKOG4068 Eukaryota
ENOG4111F6Y LUCA
HOGENOMiHOG000191978
InParanoidiC5XFB6
KOiK12189
OMAiPPFFTIQ
OrthoDBiEOG09360PVE

Family and domain databases

Gene3Di1.10.10.10, 1 hit
1.10.10.570, 1 hit
InterProiView protein in InterPro
IPR008570 ESCRT-II_cplx_Vps25-sub
IPR014041 ESCRT-II_cplx_Vps25-sub_N
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR13149 PTHR13149, 1 hit
PfamiView protein in Pfam
PF05871 ESCRT-II, 1 hit
SUPFAMiSSF46785 SSF46785, 2 hits

Sequencei

Sequence statusi: Complete.

C5XFB6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQRLGDFRLP PFFNYPPYFT LQPVRETREK QVQLWKDLIL DYCRSQKIHT
60 70 80 90 100
ISLEEDFPLF SNPKIERSLS HEAKEVFLAA LVSEGRAEWM DKGHKKCLIL
110 120 130 140 150
WLRIQDWANF ILNFVKDNGL EVMTIEEIRS GIDTRGTELE GIDRGVLMRA
160 170
LRQLEQKGKA AIFKGTSADD EGVKFSV
Length:177
Mass (Da):20,590
Last modified:September 1, 2009 - v1
Checksum:i662E8DB130DD80AD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000762 Genomic DNA Translation: EES03375.1
RefSeqiXP_002458255.1, XM_002458210.1

Genome annotation databases

EnsemblPlantsiEES03375; EES03375; SORBI_3003G243700
GeneIDi8058266
GrameneiEES03375; EES03375; SORBI_3003G243700
KEGGisbi:8058266

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000762 Genomic DNA Translation: EES03375.1
RefSeqiXP_002458255.1, XM_002458210.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb03g030020.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEES03375; EES03375; SORBI_3003G243700
GeneIDi8058266
GrameneiEES03375; EES03375; SORBI_3003G243700
KEGGisbi:8058266

Phylogenomic databases

eggNOGiKOG4068 Eukaryota
ENOG4111F6Y LUCA
HOGENOMiHOG000191978
InParanoidiC5XFB6
KOiK12189
OMAiPPFFTIQ
OrthoDBiEOG09360PVE

Family and domain databases

Gene3Di1.10.10.10, 1 hit
1.10.10.570, 1 hit
InterProiView protein in InterPro
IPR008570 ESCRT-II_cplx_Vps25-sub
IPR014041 ESCRT-II_cplx_Vps25-sub_N
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR13149 PTHR13149, 1 hit
PfamiView protein in Pfam
PF05871 ESCRT-II, 1 hit
SUPFAMiSSF46785 SSF46785, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiC5XFB6_SORBI
AccessioniPrimary (citable) accession number: C5XFB6
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 7, 2018
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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