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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3001G282400

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3001G282400Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Expressioni

Gene expression databases

ExpressionAtlasiC5WQM8 baseline

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini187 – 253WRKYInterPro annotationAdd BLAST67

Phylogenomic databases

eggNOGiENOG410JSJR Eukaryota
ENOG41108R1 LUCA
HOGENOMiHOG000243612
InParanoidiC5WQM8
OrthoDBiEOG09360J9I

Family and domain databases

Gene3Di2.20.25.80, 1 hit
InterProiView protein in InterPro
IPR003657 WRKY_dom
IPR036576 WRKY_dom_sf
PfamiView protein in Pfam
PF03106 WRKY, 1 hit
SMARTiView protein in SMART
SM00774 WRKY, 1 hit
SUPFAMiSSF118290 SSF118290, 1 hit
PROSITEiView protein in PROSITE
PS50811 WRKY, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.iShow all

C5WQM8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MCDFFWLSPA DQAGDLSDVV RASLQPPPPP PHHHRLPPPE EEEGLLLLQA
60 70 80 90 100
RVNFDGDDHD EARSQQLVHG NGSMRLMLGS NGSGGCACDH AAALCPQHHP
110 120 130 140 150
EAERLIPQPP MSGPQPQLCA ASSFVVERDD DDAPVLEEHV LDMATAPHPH
160 170 180 190 200
PHTSAIKRRK SQTKKVVCIP APVAAPPPGV GGRPSTSGEV VPSDLWAWRK
210 220 230 240 250
YGQKPIKGSP YPRGYYRCSS SKGCSARKQV ERSRTDPSML VITYTSDHNH
260 270 280 290 300
PWPTQRNALA GSTRPAFSSS SAARSHHHHH HHHHSAAAVP DTTLAHRHAS
310 320 330 340 350
NVAVADNATP GWSIISASVH HQLLKQEVVD VDNHPISKQP AQDAAADRDC
360 370 380 390 400
LDMFADMDGA LDVLCASNFH PKKQQQQVTA AQHLEKLPEE EDEHLLLGPD
410 420
PFSFSFLDWV GASFGVGETA ADNGDHS
Length:427
Mass (Da):46,313
Last modified:September 1, 2009 - v1
Checksum:i6DD751F2CAD8D9DE
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1Z5S800A0A1Z5S800_SORBI
Uncharacterized protein
SORBI_3001G282400
354Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000760 Genomic DNA Translation: EER94422.1
CM000760 Genomic DNA Translation: OQU92055.1
RefSeqiXP_002467424.1, XM_002467379.1

Genome annotation databases

EnsemblPlantsiEER94422; EER94422; SORBI_3001G282400
OQU92055; OQU92055; SORBI_3001G282400
GeneIDi8086285
GrameneiEER94422; EER94422; SORBI_3001G282400
OQU92055; OQU92055; SORBI_3001G282400
KEGGisbi:8086285

Similar proteinsi

Entry informationi

Entry nameiC5WQM8_SORBI
AccessioniPrimary (citable) accession number: C5WQM8
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: September 12, 2018
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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