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Entry version 59 (31 Jul 2019)
Sequence version 1 (28 Jul 2009)
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Protein
Submitted name:

ZYRO0G17446p

Gene

ZYRO0G17446g

Organism
Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) (Candida mogii)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
ZYRO0G17446pImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:ZYRO0G17446gImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiZygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) (Candida mogii)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri559307 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeZygosaccharomyces
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000008536 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome G

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini443 – 529RRMInterPro annotationAdd BLAST87
Domaini647 – 1001PUM-HDInterPro annotationAdd BLAST355
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati707 – 742PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati743 – 778PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati780 – 818PumilioPROSITE-ProRule annotationAdd BLAST39
Repeati854 – 889PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati891 – 927PumilioPROSITE-ProRule annotationAdd BLAST37

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 160DisorderedSequence analysisAdd BLAST160
Regioni174 – 233DisorderedSequence analysisAdd BLAST60
Regioni300 – 357DisorderedSequence analysisAdd BLAST58
Regioni1002 – 1069DisorderedSequence analysisAdd BLAST68

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi33 – 51PolarSequence analysisAdd BLAST19
Compositional biasi58 – 89PolarSequence analysisAdd BLAST32
Compositional biasi105 – 146PolarSequence analysisAdd BLAST42
Compositional biasi189 – 233PolarSequence analysisAdd BLAST45

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

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HOGENOMi
HOG000113136

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
C5E123

KEGG Orthology (KO)

More...
KOi
K17974

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.10.10, 1 hit
3.30.70.330, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR033133 PUM-HD
IPR001313 Pumilio_RNA-bd_rpt
IPR035979 RBD_domain_sf
IPR000504 RRM_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00806 PUF, 2 hits
PF00076 RRM_1, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00025 Pumilio, 6 hits
SM00360 RRM, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371 SSF48371, 1 hit
SSF54928 SSF54928, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50302 PUM, 5 hits
PS50303 PUM_HD, 1 hit
PS50102 RRM, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

C5E123-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSTKKPDTNL SNIPEVIDPG ITIPIFEDEM GPDPSSSAST QVDQQQPQKL
60 70 80 90 100
GSYRARAGKF SNTLSNLLPT ISAKLHHSKK QQQPQGKSPS EGGPVEASLA
110 120 130 140 150
GAAASRGSSG GTTTVAMPSN DSSESTVGSK NLQETPNKSK TFLPPLNGVG
160 170 180 190 200
NLTPPNDLDR LVHFPDSNYY SVGRGSSGAA PGGSCTGAGP QPPRTSNDSF
210 220 230 240 250
TFSSSMPNQI SRTRNNTVNS QVTSISSLQP NPASSSVIWS ANQTPVEQPL
260 270 280 290 300
QQSFFPSFGD EVNPLANPQA CPLNEYANNT AYPDTLMSGG INNQAAATQL
310 320 330 340 350
TIPPSSSGNN INNNNNGING NHNRNNSING HNNDNNNINQ NAAFNNHNNN
360 370 380 390 400
GAKKLTIPNS MWSNNQVLNR PRSHSNASSI YTDAPLYEQQ GRSRAASVFT
410 420 430 440 450
LSQPQPQEIP LVTDDIDSRS INWVSTDTMV PPINQISNLL PTNTISISNV
460 470 480 490 500
FSLQQQQPQL MNTVNLTSAS LATLCSKYGT VISARTLKGL NMALVEFDSV
510 520 530 540 550
ESAIRALDAL QGKEVSMIGA PSIVSFAKVL PMHQQPPQLV IPAGPVSGPD
560 570 580 590 600
AVPQPLLQEQ LFNGAMTFQQ QGNVALPIFT QQQQQQQQQS HQQQVHVSQN
610 620 630 640 650
YNHSFVHVSP NEKEQCPFPL PPPVVSDQME VLNKIIDSFG TEHDPIQTKH
660 670 680 690 700
LINNALNYQG TSETSDFGPL PDPMTPRDFD SPKLRELRKS IDANLLSDLE
710 720 730 740 750
IEQLAIAMLD ELPELSSDYL GNTIVQKLFT HSSDIVKDIM LRKTNRYLTS
760 770 780 790 800
MGVHKNGTWA CQKIIRMACT PRQIMLVTKG VEKYCTPLFN DQFGNYVIQC
810 820 830 840 850
VLKFGFPWNS FIFESIIANF WTITQNRYGA RAVRACLETH DMVTPEQTLA
860 870 880 890 900
ISSMIVLYSE YLATNSNGTL LLNWFLDTCT LAHRHSILAP NLVTHIVELC
910 920 930 940 950
RHRLASLTVL KVLNYRGDES ARRDILEAIF GNPQSDEVVQ SLHQILCDNN
960 970 980 990 1000
YGPTFIYKVL TMSLLEDDVR THAIKQVRKV LLETTPSQQH RRLMEEVGLA
1010 1020 1030 1040 1050
ATNSQPQGNQ SKHRSSISQV LNQDGSHLRG LSVSSVRSNG SRQNPLVPTT
1060 1070 1080 1090 1100
SAGQSSLQTP ANTNGATPGT AGYMNFPGMF PMGYGNSNNG SYPVNGDDLT
1110 1120 1130 1140 1150
TQFDMLNLNS NTHLSLPQLS LTNPGNNGVN VMSPNKNSAQ DVPLNNGMFG

Y
Length:1,151
Mass (Da):125,374
Last modified:July 28, 2009 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i64AA502FEB76F66D
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CU928179 Genomic DNA Translation: CAR29807.1

NCBI Reference Sequences

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RefSeqi
XP_002498740.1, XM_002498695.1

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
CAR29807; CAR29807; ZYRO0G17446g

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
8206567

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
zro:ZYRO0G17446g

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU928179 Genomic DNA Translation: CAR29807.1
RefSeqiXP_002498740.1, XM_002498695.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblFungiiCAR29807; CAR29807; ZYRO0G17446g
GeneIDi8206567
KEGGizro:ZYRO0G17446g

Phylogenomic databases

HOGENOMiHOG000113136
InParanoidiC5E123
KOiK17974

Family and domain databases

Gene3Di1.25.10.10, 1 hit
3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR033133 PUM-HD
IPR001313 Pumilio_RNA-bd_rpt
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00806 PUF, 2 hits
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00025 Pumilio, 6 hits
SM00360 RRM, 1 hit
SUPFAMiSSF48371 SSF48371, 1 hit
SSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50302 PUM, 5 hits
PS50303 PUM_HD, 1 hit
PS50102 RRM, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiC5E123_ZYGRC
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: C5E123
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: July 31, 2019
This is version 59 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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