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Protein
Submitted name:

Alpha amylase catalytic region

Gene

GWCH70_0700

Organism
Geobacillus sp. (strain WCH70)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciGSP471223:GH2C-737-MONOMER

Protein family/group databases

CAZyiCBM20 Carbohydrate-Binding Module Family 20
GH13 Glycoside Hydrolase Family 13

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:GWCH70_0700Imported
OrganismiGeobacillus sp. (strain WCH70)Imported
Taxonomic identifieri471223 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
Proteomesi
  • UP000002386 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi471223.GWCH70_0700

Structurei

3D structure databases

ProteinModelPortaliC5D6S5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini662 – 767CBM20InterPro annotationAdd BLAST106

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4108IUK Bacteria
COG0366 LUCA
HOGENOMiHOG000085496
OMAiTEILYST
OrthoDBiPOG091H07J7

Family and domain databases

Gene3Di2.60.40.10, 2 hits
2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR031319 A-amylase_C
IPR006046 Alpha_amylase
IPR013784 Carb-bd-like_fold
IPR002044 CBM_fam20
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF00686 CBM_20, 1 hit
PRINTSiPR00110 ALPHAAMYLASE
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SM00632 Aamy_C, 1 hit
SM01065 CBM_2, 1 hit
SUPFAMiSSF49452 SSF49452, 1 hit
SSF51445 SSF51445, 1 hit
SSF81296 SSF81296, 1 hit
PROSITEiView protein in PROSITE
PS51166 CBM20, 1 hit

Sequencei

Sequence statusi: Complete.

C5D6S5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWKVPKFIKQ SYLVFLLALL LYSSFGFSFS RTEATTSTGA LGPVTPKDTI
60 70 80 90 100
YQIVTDRFFD GDPSNNKPPG FDPTLFDDPD GNNQGNGKDL KLYQGGDFQG
110 120 130 140 150
IIDKIPYLKN MGITAVWISA PYENRDTVIE DYQSDGSINR WTSFHGYHAR
160 170 180 190 200
NYFATNKHFG TMKDFIRLRD ALHQNGIKLV IDFVSNHSSR WQNPTLNFAP
210 220 230 240 250
EDGKLYEPDK DANGNYVFDA NGEPADYNGD GKVENLLADP HNDVNGFFHG
260 270 280 290 300
LGDRGNDTSR FGYRYKDLGS LADYSQENAL VVEHLEKAAK FWKSKGIDGF
310 320 330 340 350
RHDATLHMNP AFVKGFKDAI DSDAGGPVTH FGEFFIGRPD PKYDEYRTFP
360 370 380 390 400
ERTGVNNLDF EYFRAATNAF GNFSETMSSF GDMMIKTSND YIYENQTVTF
410 420 430 440 450
LDNHDVTRFR YIQPNDKPYH AALAVLMTSR GIPNIYYGTE QYLMPSDSSD
460 470 480 490 500
IAGRMFMQTS TNFDENTTAY KVIQKLSNLR KNNEAIAYGT TEILYSTNDV
510 520 530 540 550
LVFKRQFYDK QVIVAVNRQP DQTFTIPELD TTLPVGTYSD VLGGLLYGSS
560 570 580 590 600
MSVNNVNGQN KISSFTLSGG EVNVWSYNPS LGTLTPRIGD VISTMGRPGN
610 620 630 640 650
TVYIYGTGLG GSVTVKFGST VATVVSNSDQ MIEAIVPNTN PGIQNITVTK
660 670 680 690 700
GSVTSNPFRY EILSGDQVQV IFHVNATTNW GENIYVVGNI PELGSWDPNQ
710 720 730 740 750
SSEAMLNPNY PEWFLPVSVP KGATFEFKFI KKDNNGNVIW ESRSNRVFTA
760
PNSSTGTIDT PLYFWDN
Length:767
Mass (Da):85,785
Last modified:July 28, 2009 - v1
Checksum:i98628F41EA7BBB1C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001638 Genomic DNA Translation: ACS23592.1
RefSeqiWP_012749393.1, NC_012793.1

Genome annotation databases

EnsemblBacteriaiACS23592; ACS23592; GWCH70_0700
KEGGigwc:GWCH70_0700

Similar proteinsi

Entry informationi

Entry nameiC5D6S5_GEOSW
AccessioniPrimary (citable) accession number: C5D6S5
Entry historyiIntegrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 23, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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