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Entry version 46 (26 Feb 2020)
Sequence version 1 (28 Jul 2009)
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Protein
Submitted name:

TraG-like protein

Gene

bglu_3p0180

Organism
Burkholderia glumae (strain BGR1)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
BGLU626418:GJI5-5563-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
TraG-like proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:bglu_3p0180Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates if the gene coding for the protein originates from the hydrogenosome, the mitochondrion, the nucleomorph, different plastids or a plasmid. The absence of this section means that the gene is located in one of the main chromosomal element(s).<p><a href='/help/encoded_on' target='_top'>More...</a></p>Encoded oniPlasmid bglu_3pImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBurkholderia glumae (strain BGR1)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri626418 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002187 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Plasmid bglu_3p

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei33 – 51HelicalSequence analysisAdd BLAST19
Transmembranei342 – 362HelicalSequence analysisAdd BLAST21
Transmembranei374 – 395HelicalSequence analysisAdd BLAST22
Transmembranei425 – 442HelicalSequence analysisAdd BLAST18

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Cellular componenti

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini4 – 461TraG_NInterPro annotationAdd BLAST458

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni580 – 614DisorderedSequence analysisAdd BLAST35
Regioni644 – 692DisorderedSequence analysisAdd BLAST49
Regioni780 – 848DisorderedSequence analysisAdd BLAST69
Regioni895 – 940DisorderedSequence analysisAdd BLAST46
Regioni989 – 1027DisorderedSequence analysisAdd BLAST39
Regioni1087 – 1148DisorderedSequence analysisAdd BLAST62

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi787 – 803PolyampholyteSequence analysisAdd BLAST17
Compositional biasi806 – 822PolarSequence analysisAdd BLAST17
Compositional biasi831 – 848PolarSequence analysisAdd BLAST18
Compositional biasi900 – 914PolarSequence analysisAdd BLAST15
Compositional biasi1105 – 1135PolarSequence analysisAdd BLAST31

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_260494_0_0_4

KEGG Orthology (KO)

More...
KOi
K12056

Identification of Orthologs from Complete Genome Data

More...
OMAi
WTIVAIG

Database of Orthologous Groups

More...
OrthoDBi
231331at2

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR012931, TraG_N

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF07916, TraG_N, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

C5ANK1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNMEIDTYGN VDTLYYVFNG IASFMGSGSF SGFMRFTLLS GLLIAMVAAI
60 70 80 90 100
GRKSTDIVKW FASAMFITQL LVAPVENVFI TDVTGVQPTR EVDHVPAYLS
110 120 130 140 150
AIAQASTTVS TAVTQAYETV FSVPDSLQLQ KGDLGFGISV LQKVNQAQIV
160 170 180 190 200
DPGLEADLMQ FFKECTVYDI QDGAINPQTI MSGTDPFNTV FTQTSPARYV
210 220 230 240 250
TTNTLTANPT TDTCLATGTL LLIRVTDAEQ KAEQMYGKEM YPQVTDASAA
260 270 280 290 300
KAAFVNAIGD SYGFILQSSQ NASSALRQAM FNNVWRQAGA DLPAMLNDPA
310 320 330 340 350
RVAEVNALMS SAQAAVAANG SMASVAILAK ETLPTVRNYA EAIIYTIFPI
360 370 380 390 400
VIVLCLVGGG EAAKRILGGY AKTIAWIGLW PVIFAVLNGL SLMHLSSKMQ
410 420 430 440 450
AMSLQAGVPF GMAAKFGSTL IDEQVLLGYM VILTPALAWG LLNMATTSVV
460 470 480 490 500
GAFQGVAGGF QGIAQQIGGQ QAQGDENIGN VHMDTSSIGN STRNVTSANK
510 520 530 540 550
YDTAGLFRTG STTIEQGTGS SFTNFDNGLI TRADTQSSLG FAMSSQSAIE
560 570 580 590 600
KTVGADTSTG ISATKTSTAF AARDQVASGT TSLASSKERG NSQRSGDEAT
610 620 630 640 650
KGVHGSTTQA VDLRRTKDQQ YVIDQTHSVE DQLSTGVRGS LQLGGTFEKS
660 670 680 690 700
FGDGAPGQPA SGVRGGMPAG ARQGAPRSVG AGTGNPPANS PIFSQAEEDR
710 720 730 740 750
LAQKASSLGK SPQEIQDVRD AYRNKVRGVD YATGGGTGGG RAAGKLGGEL
760 770 780 790 800
AIDGGRTRAW RDSEAQRFVD QYGSFAGYTE GSQVSHDASK NHSEYKGAES
810 820 830 840 850
GQHARTEHAA SLTEQASSGA RDAADLTRTA DVRQRGSTQQ VSRVDTTNNL
860 870 880 890 900
LTPENLQAVA ARNGMRYGRL MTLPAAEIQR LVSEDALMRD LVKRNSALPP
910 920 930 940 950
TARDGSSLPS GQGDVVRQNK HDRSGIGANI PGAFQRFSSD VGPVDTTPLD
960 970 980 990 1000
VKPSVPSEVS GAQARVDAVR QRVSDDADLP IRQVQDHVIP SDDNRSLMTL
1010 1020 1030 1040 1050
DRSPARPLVT RPTGESPGTS SPERLSEADF KIVPIDGPSS EMTPARSAGA
1060 1070 1080 1090 1100
AVVQPKLSAG DFQIISADDH GGGSVTAATG VATDDLNLSR PDFTRMPADG
1110 1120 1130 1140
LTANASAAKP TSISASSDSL PARSESGSSI GRTDPAGSSL GDKEGGKQ
Length:1,148
Mass (Da):120,200
Last modified:July 28, 2009 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i0878E83B86C7ACA6
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
CP001507 Genomic DNA Translation: ACR32794.1

NCBI Reference Sequences

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RefSeqi
WP_012732818.1, NC_012720.2

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ACR32794; ACR32794; bglu_3p0180

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
bgl:bglu_3p0180

Pathosystems Resource Integration Center (PATRIC)

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PATRICi
fig|626418.3.peg.113

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001507 Genomic DNA Translation: ACR32794.1
RefSeqiWP_012732818.1, NC_012720.2

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiACR32794; ACR32794; bglu_3p0180
KEGGibgl:bglu_3p0180
PATRICifig|626418.3.peg.113

Phylogenomic databases

HOGENOMiCLU_260494_0_0_4
KOiK12056
OMAiWTIVAIG
OrthoDBi231331at2

Enzyme and pathway databases

BioCyciBGLU626418:GJI5-5563-MONOMER

Family and domain databases

InterProiView protein in InterPro
IPR012931, TraG_N
PfamiView protein in Pfam
PF07916, TraG_N, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiC5ANK1_BURGB
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: C5ANK1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: February 26, 2020
This is version 46 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

PlasmidImported, Reference proteomeImported
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