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Protein

2-keto-3-deoxygluconate permease

Gene

kdgT

Organism
Escherichia coli (strain K12 / MC4100 / BW2952)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system.UniRule annotation

GO - Molecular functioni

Keywordsi

Biological processSugar transport, Symport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
2-keto-3-deoxygluconate permeaseUniRule annotation
Short name:
KDG permeaseUniRule annotation
Gene namesi
Name:kdgTUniRule annotation
Ordered Locus Names:BWG_3579
OrganismiEscherichia coli (strain K12 / MC4100 / BW2952)
Taxonomic identifieri595496 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia

Subcellular locationi

  • Cell inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei10 – 30HelicalUniRule annotationAdd BLAST21
Transmembranei42 – 62HelicalUniRule annotationAdd BLAST21
Transmembranei73 – 93HelicalUniRule annotationAdd BLAST21
Transmembranei95 – 115HelicalUniRule annotationAdd BLAST21
Transmembranei139 – 159HelicalUniRule annotationAdd BLAST21
Transmembranei163 – 183HelicalUniRule annotationAdd BLAST21
Transmembranei199 – 219HelicalUniRule annotationAdd BLAST21
Transmembranei224 – 244HelicalUniRule annotationAdd BLAST21
Transmembranei254 – 274HelicalUniRule annotationAdd BLAST21
Transmembranei289 – 309HelicalUniRule annotationAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10002024411 – 3272-keto-3-deoxygluconate permeaseAdd BLAST327

Structurei

3D structure databases

ProteinModelPortaliC5A077
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the KdgT transporter family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000221851
KOiK02526
OMAiESGPFMT

Family and domain databases

HAMAPiMF_00070 KdgT, 1 hit
InterProiView protein in InterPro
IPR004684 2keto-3dGluconate_permease
IPR018395 2keto-3dGluconate_permease_sub
PfamiView protein in Pfam
PF03812 KdgT, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD024513 2keto-3dGluconate_permease, 1 hit
TIGRFAMsiTIGR00793 kdgT, 1 hit

Sequencei

Sequence statusi: Complete.

C5A077-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQIKRSIEKI PGGMMLVPLF LGALCHTFSP GAGKYFGSFT NGMITGTVPI
60 70 80 90 100
LAVWFFCMGA SIKLSATGTV LRKSGTLVVT KIAVAWVVAA IASRIIPEHG
110 120 130 140 150
VEVGFFAGLS TLALVAAMDM TNGGLYASIM QQYGTKEEAG AFVLMSLESG
160 170 180 190 200
PLMTMIILGT AGIASFEPHV FVGAVLPFLV GFALGNLDPE LREFFSKAVQ
210 220 230 240 250
TLIPFFAFAL GNTIDLTVIA QTGLLGILLG VAVIIVTGIP LIIADKLIGG
260 270 280 290 300
GDGTAGIAAS SSAGAAVATP VLIAEMVPAF KPMAPAATSL VATAVIVTSI
310 320
LVPILTSIWS RKVKARAAKI EILGTVK
Length:327
Mass (Da):33,669
Last modified:July 28, 2009 - v1
Checksum:i8F870CB233B35453
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001396 Genomic DNA Translation: ACR61769.1
RefSeqiWP_001166063.1, NC_012759.1

Genome annotation databases

EnsemblBacteriaiACR61769; ACR61769; BWG_3579
KEGGiebw:BWG_3579

Similar proteinsi

Entry informationi

Entry nameiKDGT_ECOBW
AccessioniPrimary (citable) accession number: C5A077
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: July 28, 2009
Last modified: June 7, 2017
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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