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Protein
Submitted name:

RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III

Gene

PAS_chr2-2_0434

Organism
Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
RNA polymerase subunit ABC23, common to RNA polymerases I, II, and IIIImported
Gene namesi
Ordered Locus Names:PAS_chr2-2_0434Imported
OrganismiKomagataella phaffii (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris)Imported
Taxonomic identifieri644223 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesPhaffomycetaceaeKomagataella
Proteomesi
  • UP000000314 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi644223.XP_002491755.1

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5X4ZX-ray7.80F/R1-155[»]
5X50X-ray4.29F1-155[»]
5X51X-ray7.00F/R1-155[»]
5XOGX-ray3.00F1-155[»]
5XONelectron microscopy3.83F1-155[»]
SMRiC4R1V1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3405 Eukaryota
COG1758 LUCA
HOGENOMiHOG000225272
InParanoidiC4R1V1
KOiK03014
OMAiRTIVNGG
OrthoDBiEOG092C5A9A

Family and domain databases

Gene3Di3.90.940.10, 1 hit
HAMAPiMF_00192 RNApol_arch_K, 1 hit
InterProiView protein in InterPro
IPR020708 DNA-dir_RNA_polK_14-18kDa_CS
IPR006110 Pol_omega/K/RPB6
IPR012293 RNAP_RPB6_omega
IPR028363 RPB6
IPR036161 RPB6/omega_like_sf
IPR006111 RpoK/Rpb6
PfamiView protein in Pfam
PF01192 RNA_pol_Rpb6, 1 hit
PIRSFiPIRSF500154 RPB6, 1 hit
PIRSF000778 RpoK/RPB6, 1 hit
SMARTiView protein in SMART
SM01409 RNA_pol_Rpb6, 1 hit
SUPFAMiSSF63562 SSF63562, 1 hit
PROSITEiView protein in PROSITE
PS01111 RNA_POL_K_14KD, 1 hit

Sequencei

Sequence statusi: Complete.

C4R1V1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEDEAFNEQ TENFENFEDE HFSDDNFEDR STQPEDYAVG VTADGRQIIN
60 70 80 90 100
GDGIQEVNGT IKAHRKRSNK ELAILKEERT TTPYLTKYER ARILGTRALQ
110 120 130 140 150
ISMNAPVLVD IEGETDPLQI AMKELSQRKI PLVIRRYLPD GSYEDWGCDE

LIVDN
Length:155
Mass (Da):17,784
Last modified:July 7, 2009 - v1
Checksum:iD7D9FB883CB39666
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN392320 Genomic DNA Translation: CAY69475.1
RefSeqiXP_002491755.1, XM_002491710.1

Genome annotation databases

EnsemblFungiiCAY69475; CAY69475; PAS_chr2-2_0434
GeneIDi8199137
KEGGippa:PAS_chr2-2_0434

Similar proteinsi

Entry informationi

Entry nameiC4R1V1_KOMPG
AccessioniPrimary (citable) accession number: C4R1V1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 7, 2009
Last sequence update: July 7, 2009
Last modified: April 25, 2018
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

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