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Protein
Submitted name:

Uncharacterized protein

Gene

BRAFLDRAFT_89977

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIon channel, Potassium channelSAAS annotation, Voltage-gated channelSAAS annotation
Biological processIon transport, Potassium transport, Transport
LigandPotassium

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:BRAFLDRAFT_89977Imported
OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
Taxonomic identifieri7739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
Proteomesi
  • UP000001554 Componenti: Partially assembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei284 – 306HelicalSequence analysisAdd BLAST23
Transmembranei318 – 340HelicalSequence analysisAdd BLAST23
Transmembranei386 – 408HelicalSequence analysisAdd BLAST23
Transmembranei449 – 470HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi7739.JGI89977

Structurei

3D structure databases

ProteinModelPortaliC3XS89
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini87 – 186BTBInterPro annotationAdd BLAST100

Sequence similaritiesi

Belongs to the potassium channel family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG1545 Eukaryota
COG1226 LUCA
InParanoidiC3XS89

Family and domain databases

Gene3Di1.20.120.350, 1 hit
InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR005821 Ion_trans_dom
IPR003968 K_chnl_volt-dep_Kv
IPR003972 K_chnl_volt-dep_Kv1
IPR011333 SKP1/BTB/POZ_sf
IPR003131 T1-type_BTB
IPR028325 VG_K_chnl
IPR027359 Volt_channel_dom_sf
PANTHERiPTHR11537 PTHR11537, 1 hit
PfamiView protein in Pfam
PF02214 BTB_2, 1 hit
PF00520 Ion_trans, 1 hit
PRINTSiPR00169 KCHANNEL
PR01491 KVCHANNEL
PR01496 SHAKERCHANEL
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SUPFAMiSSF54695 SSF54695, 1 hit

Sequencei

Sequence statusi: Complete.

C3XS89-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAYTRDGTD AQLSLPAPYV HDVQRNVRVT EDDTSKKHNK GSTEAAKDGE
60 70 80 90 100
QSLPWQRRSS LEKKVKGQVQ TKGQAQNGGN TKTIENHVIR MNVSGMHFFT
110 120 130 140 150
HENILSRYPD TLLGDASRRK KFYCKDYDEY FFDRHRPSFE GILFYYQTGI
160 170 180 190 200
MKRPRNVPVE IFVMELKYFD MGDSVIKDLL KNEGCYVPDE ELEPQNRIKR
210 220 230 240 250
IIWDLFEQPE SSAGARIVAV LSFLFILISV AETCVETLPQ FRTTDADLLN
260 270 280 290 300
ISDMLTNSTE PPTNTTASKS LEETISQLQS AFQNPFFCVE TACVVWFTLE
310 320 330 340 350
LAMRFYACPS KAAFAKKLLN IIDFAAILPF FVTLVLIVFA TSRERAALSL
360 370 380 390 400
VVLRILRLVR VLRILKLSRH VKAMRLLAVT VYESRHALGS LFLFLMIGVV
410 420 430 440 450
TFATGIYVTE EYVPETFFTS IPDSFWWAII TMTTVGYGDT YPQGGAGKLV
460 470 480 490 500
AVFSFFFGIL IMAMLMPIFV DKFNAMYVYE MTNPYRAIND LKPEPEDTPE
510
NTEKIEQRET SL
Length:512
Mass (Da):58,398
Last modified:July 28, 2009 - v1
Checksum:iDC95DCC3EF6B130C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG666457 Genomic DNA Translation: EEN69104.1
RefSeqiXP_002613095.1, XM_002613049.1

Genome annotation databases

GeneIDi7209144
KEGGibfo:BRAFLDRAFT_89977

Similar proteinsi

Entry informationi

Entry nameiC3XS89_BRAFL
AccessioniPrimary (citable) accession number: C3XS89
Entry historyiIntegrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: February 28, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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