Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

tRNA pseudouridine synthase D

Gene

truD

Organism
Pseudomonas fluorescens (strain SBW25)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.UniRule annotation

Catalytic activityi

tRNA uridine(13) = tRNA pseudouridine(13).UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei81NucleophileUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomerase
Biological processtRNA processing

Enzyme and pathway databases

BioCyciPFLU216595:G1G1K-1902-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase DUniRule annotation (EC:5.4.99.27UniRule annotation)
Alternative name(s):
tRNA pseudouridine(13) synthaseUniRule annotation
tRNA pseudouridylate synthase DUniRule annotation
tRNA-uridine isomerase DUniRule annotation
Gene namesi
Name:truDUniRule annotation
Ordered Locus Names:PFLU_1298
OrganismiPseudomonas fluorescens (strain SBW25)
Taxonomic identifieri216595 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002332 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10002135161 – 352tRNA pseudouridine synthase DAdd BLAST352

Interactioni

Protein-protein interaction databases

STRINGi216595.PFLU1298

Structurei

3D structure databases

ProteinModelPortaliC3K704
SMRiC3K704
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini157 – 303TRUDUniRule annotationAdd BLAST147

Sequence similaritiesi

Belongs to the pseudouridine synthase TruD family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4106NZV Bacteria
COG0585 LUCA
KOiK06176
OMAiGNRFFMR
OrthoDBiPOG091H03KK

Family and domain databases

HAMAPiMF_01082 TruD, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR001656 PsdUridine_synth_TruD
IPR020119 PsdUridine_synth_TruD_CS
IPR011760 PsdUridine_synth_TruD_insert
PANTHERiPTHR13326 PTHR13326, 3 hits
PfamiView protein in Pfam
PF01142 TruD, 2 hits
SUPFAMiSSF55120 SSF55120, 1 hit
PROSITEiView protein in PROSITE
PS50984 TRUD, 1 hit
PS01268 UPF0024, 1 hit

Sequencei

Sequence statusi: Complete.

C3K704-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDLELLGPR AYGEALGSAV LKATAEDFQV DEVLDIPLTG EGEHLWLWVE
60 70 80 90 100
KRGLNTEEAA RRIAKAAGVP LRTVSYAGLK DRQALTRQWF SVQLPGKADP
110 120 130 140 150
DMSAAENDTL RILKTGRHKR KLQRGAHSAN GFTLRLTQLV GDTAAIDARL
160 170 180 190 200
QLIAQHGIPN YFGTQRFGHN GGNVVDAREW AVRKALPEQR NARSRLLSTA
210 220 230 240 250
RSYLFNKVLA ARVAEGSWQR AQVGDLLAFT DSRSFFPAGE AECSDPRLAI
260 270 280 290 300
LDLHPTGPQW GEGDSPASGA TFELEQAVAA GEADLRDWLV NAGMSQERRI
310 320 330 340 350
LRLPIGGLTW HYPSLDILQL EFVLPAGCFA TVLVRELVDL VPVGQTDNPC

VF
Length:352
Mass (Da):38,595
Last modified:June 16, 2009 - v1
Checksum:iA40E0570EE13DA6A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM181176 Genomic DNA Translation: CAY47554.1
RefSeqiWP_012722615.1, NC_012660.1

Genome annotation databases

EnsemblBacteriaiCAY47554; CAY47554; PFLU_1298
KEGGipfs:PFLU_1298
PATRICifig|216595.4.peg.1529

Similar proteinsi

Entry informationi

Entry nameiTRUD_PSEFS
AccessioniPrimary (citable) accession number: C3K704
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: June 16, 2009
Last modified: May 23, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health