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Protein
Submitted name:

U4/U6 small nuclear ribonucleoprotein Prp3

Gene

PRP3

Organism
Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) (Picoplanktonic green alga)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoproteinImported, Viral nucleoproteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
U4/U6 small nuclear ribonucleoprotein Prp3Imported
Gene namesi
Name:PRP3Imported
ORF Names:MICPUN_60552Imported
OrganismiMicromonas commoda (strain RCC299 / NOUM17 / CCMP2709) (Picoplanktonic green alga)Imported
Taxonomic identifieri296587 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaprasinophytesMamiellophyceaeMamiellalesMamiellaceaeMicromonas
Proteomesi
  • UP000002009 Componenti: Chromosome 8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Virion

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini191 – 430PRP3InterPro annotationAdd BLAST240
Domaini456 – 582DUF1115InterPro annotationAdd BLAST127

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili69 – 89Sequence analysisAdd BLAST21
Coiled coili241 – 261Sequence analysisAdd BLAST21
Coiled coili347 – 367Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

HOGENOMiHOG000205412
InParanoidiC1FFL0
KOiK12843
OMAiYRRLMLH

Family and domain databases

InterProiView protein in InterPro
IPR010541 DUF1115
IPR013881 Pre-mRNA_splic_Prp3
IPR027104 Prp3
PANTHERiPTHR14212 PTHR14212, 1 hit
PfamiView protein in Pfam
PF06544 DUF1115, 1 hit
PF08572 PRP3, 1 hit

Sequencei

Sequence statusi: Complete.

C1FFL0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGGSAEKRK AEEADAAPEE GARRSKRRRW DSADDANADA GAAAEASKDA
60 70 80 90 100
PATDEPAAEK PAPSVAEKLA KAKAAAAKAM ELAEKLRAAK APPGPAPAPG
110 120 130 140 150
AKAPSAAVQR ALELAGKIKG ATAAASTVAK GPGALRLNDK GQEVDEQGNL
160 170 180 190 200
VTANVVAVST FAVNAKSAKL EAFANAEKAA ADAIADDGAE AWQDPRMGKG
210 220 230 240 250
GRRRDRRSTF QFVKEGKFQR QADMVRLQAK FGETEARKIA AREARERRAA
260 270 280 290 300
AERERLEATA DPNLIPLGAR AGIKGGMAGA AQSRAAAVLD EVPDVEWWDA
310 320 330 340 350
HILANGSYDD VSDGRWDIKP EKITPYVEHP VPMQPPMEAP PPPPQPLKLT
360 370 380 390 400
KREQKKLRTQ RRQQREQEKQ EMIRQGLLEP PKPKVKISNL MRVLTDEATA
410 420 430 440 450
DPTAIEKEVR KQMEERASAH EDRNLARQLT PAERREKKIR KLFDDPSGGV
460 470 480 490 500
ETQVHVYRVE SLSNPKNKFR VDINAQENRL SGVCLITESF CIVIVEGGIK
510 520 530 540 550
SVRRYEKLMM RRIDWNAHTD GAMEYDDDTP LGEEAVNKCT CVWKGTAPKP
560 570 580 590
SFKKFRFETL RTEAAARKYL QEMNLAHLFD AAAACVAVSA DFDDDA
Length:596
Mass (Da):65,036
Last modified:May 26, 2009 - v1
Checksum:iB11A9828FC8CF2A3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001575 Genomic DNA Translation: ACO69101.1
RefSeqiXP_002507843.1, XM_002507797.1

Genome annotation databases

GeneIDi8245766
KEGGimis:MICPUN_60552

Similar proteinsi

Entry informationi

Entry nameiC1FFL0_MICCC
AccessioniPrimary (citable) accession number: C1FFL0
Entry historyiIntegrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: March 28, 2018
This is version 32 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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