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Protein

Chaperonin 60 subunit beta 3, chloroplastic

Gene

CPN60B3

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Involved in protein assisted folding.2 Publications

Miscellaneous

Assisted protein folding requires ATP hydrolysis, but not K+ ions.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionChaperone
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Chaperonin 60 subunit beta 3, chloroplastic
Short name:
CPN-60 beta 3
Gene namesi
Name:CPN60B3
Synonyms:Cpn60-B(1)
Ordered Locus Names:At5g56500
ORF Names:MCD7.27
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G56500
TAIRilocus:2161048 AT5G56500

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 29ChloroplastSequence analysisAdd BLAST29
ChainiPRO_000041368530 – 597Chaperonin 60 subunit beta 3, chloroplasticAdd BLAST568

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei97PhosphoserineBy similarity1
Modified residuei474PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiC0Z361
PRIDEiC0Z361
ProMEXiC0Z361

PTM databases

iPTMnetiC0Z361

Expressioni

Inductioni

Up-regulated by light.1 Publication

Gene expression databases

ExpressionAtlasiC0Z361 baseline and differential
GenevisibleiC0Z361 AT

Interactioni

Subunit structurei

Part of the Cpn60 complex composed of 7 alpha and 7 beta subunits. Can also form a complex composed of 14 beta subunits only. Both complexes show ATPase activity. The Cpn60 complex interacts with the Cpn10 complex.2 Publications

GO - Molecular functioni

Protein-protein interaction databases

BioGridi20995, 1 interactor
STRINGi3702.AT5G56500.1

Structurei

3D structure databases

ProteinModelPortaliC0Z361
SMRiC0Z361
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili387 – 489Sequence analysisAdd BLAST103

Sequence similaritiesi

Belongs to the chaperonin (HSP60) family.Curated

Keywords - Domaini

Coiled coil, Transit peptide

Phylogenomic databases

eggNOGiKOG0356 Eukaryota
COG0459 LUCA
HOGENOMiHOG000076290
InParanoidiC0Z361
KOiK04077
OMAiPRICAMA
OrthoDBiEOG093606CX
PhylomeDBiC0Z361

Family and domain databases

CDDicd03344 GroEL, 1 hit
Gene3Di1.10.560.10, 2 hits
3.30.260.10, 2 hits
3.50.7.10, 1 hit
HAMAPiMF_00600 CH60, 1 hit
InterProiView protein in InterPro
IPR018370 Chaperonin_Cpn60_CS
IPR001844 Chaprnin_Cpn60
IPR002423 Cpn60/TCP-1
IPR027409 GroEL-like_apical_dom_sf
IPR027413 GROEL-like_equatorial_sf
IPR027410 TCP-1-like_intermed_sf
PfamiView protein in Pfam
PF00118 Cpn60_TCP1, 1 hit
PRINTSiPR00298 CHAPERONIN60
SUPFAMiSSF48592 SSF48592, 2 hits
SSF52029 SSF52029, 1 hit
SSF54849 SSF54849, 1 hit
TIGRFAMsiTIGR02348 GroEL, 1 hit
PROSITEiView protein in PROSITE
PS00296 CHAPERONINS_CPN60, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C0Z361-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASTFSATSS MGSSLAPPSN RLSSFVSISS SSFGRTQSIA QRKARFPKIY
60 70 80 90 100
AAKQLHFNKD GTAIKKLQAG VNKLADLVGV TLGPKGRNVV LESKYGSPRI
110 120 130 140 150
VNDGVTVARE VELEDPVENI GAKLVRQAAS KTNDLAGDGT TTSVVLAQGL
160 170 180 190 200
IAEGVKVVAA GANPVLITRG IEKTTKALVA ELKKMSKEVE DSELADVAAV
210 220 230 240 250
SAGNNYEVGN MIAEAMAKVG RKGVVTLEEG KSAENSLYVV EGMQFDRGYI
260 270 280 290 300
SPYFVTDSEK MCAEYENCKL FLVDKKITNA RDIISILEDA IKGGYPLLII
310 320 330 340 350
AEDIEQEPLA TLVVNKLRGT IKVAALKAPG FGERKSQYLD DIAALTGATV
360 370 380 390 400
IREEVGLQLE KVGPEVLGNA GKVVLTKDTT TIVGDGSTEE VVKKRVEQIK
410 420 430 440 450
NLIEAAEQDY EKEKLNERIA KLSGGVAVIQ VGAQTETELK EKKLRVEDAL
460 470 480 490 500
NATKAAVEEG IVVGGGCTLL RLASKVDAIK ETLANDEEKV GADIVKKALS
510 520 530 540 550
YPLKLIAKNA GVNGSVVSEK VLSSDNPKHG YNAATGKYED LMAAGIIDPT
560 570 580 590
KVVRCCLEHA SSVAKTFLMS DCVVVEIKEP ESAAPAGNPM DNSGYGF
Length:597
Mass (Da):63,325
Last modified:May 26, 2009 - v1
Checksum:i3B0BDFF3AFFA5F0E
GO

Sequence cautioni

The sequence BAB11583 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti545G → R in BAF00280 (Ref. 4) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB019234, AB009049 Genomic DNA Translation: BAB11583.1 Sequence problems.
CP002688 Genomic DNA Translation: AED96773.1
CP002688 Genomic DNA Translation: AED96774.1
AK228340 mRNA Translation: BAF00280.1
AK319025 mRNA Translation: BAH57140.1
RefSeqiNP_001032083.1, NM_001037006.4
NP_200461.4, NM_125033.5
UniGeneiAt.43152

Genome annotation databases

EnsemblPlantsiAT5G56500.1; AT5G56500.1; AT5G56500
AT5G56500.2; AT5G56500.2; AT5G56500
GeneIDi835751
GrameneiAT5G56500.1; AT5G56500.1; AT5G56500
AT5G56500.2; AT5G56500.2; AT5G56500
KEGGiath:AT5G56500

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB019234, AB009049 Genomic DNA Translation: BAB11583.1 Sequence problems.
CP002688 Genomic DNA Translation: AED96773.1
CP002688 Genomic DNA Translation: AED96774.1
AK228340 mRNA Translation: BAF00280.1
AK319025 mRNA Translation: BAH57140.1
RefSeqiNP_001032083.1, NM_001037006.4
NP_200461.4, NM_125033.5
UniGeneiAt.43152

3D structure databases

ProteinModelPortaliC0Z361
SMRiC0Z361
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi20995, 1 interactor
STRINGi3702.AT5G56500.1

PTM databases

iPTMnetiC0Z361

Proteomic databases

PaxDbiC0Z361
PRIDEiC0Z361
ProMEXiC0Z361

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G56500.1; AT5G56500.1; AT5G56500
AT5G56500.2; AT5G56500.2; AT5G56500
GeneIDi835751
GrameneiAT5G56500.1; AT5G56500.1; AT5G56500
AT5G56500.2; AT5G56500.2; AT5G56500
KEGGiath:AT5G56500

Organism-specific databases

AraportiAT5G56500
TAIRilocus:2161048 AT5G56500

Phylogenomic databases

eggNOGiKOG0356 Eukaryota
COG0459 LUCA
HOGENOMiHOG000076290
InParanoidiC0Z361
KOiK04077
OMAiPRICAMA
OrthoDBiEOG093606CX
PhylomeDBiC0Z361

Miscellaneous databases

PROiPR:C0Z361

Gene expression databases

ExpressionAtlasiC0Z361 baseline and differential
GenevisibleiC0Z361 AT

Family and domain databases

CDDicd03344 GroEL, 1 hit
Gene3Di1.10.560.10, 2 hits
3.30.260.10, 2 hits
3.50.7.10, 1 hit
HAMAPiMF_00600 CH60, 1 hit
InterProiView protein in InterPro
IPR018370 Chaperonin_Cpn60_CS
IPR001844 Chaprnin_Cpn60
IPR002423 Cpn60/TCP-1
IPR027409 GroEL-like_apical_dom_sf
IPR027413 GROEL-like_equatorial_sf
IPR027410 TCP-1-like_intermed_sf
PfamiView protein in Pfam
PF00118 Cpn60_TCP1, 1 hit
PRINTSiPR00298 CHAPERONIN60
SUPFAMiSSF48592 SSF48592, 2 hits
SSF52029 SSF52029, 1 hit
SSF54849 SSF54849, 1 hit
TIGRFAMsiTIGR02348 GroEL, 1 hit
PROSITEiView protein in PROSITE
PS00296 CHAPERONINS_CPN60, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiCPNB3_ARATH
AccessioniPrimary (citable) accession number: C0Z361
Secondary accession number(s): Q0WRG9, Q9FHA9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 19, 2011
Last sequence update: May 26, 2009
Last modified: May 23, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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Main funding by: National Institutes of Health

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