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Entry version 85 (10 Feb 2021)
Sequence version 2 (03 Nov 2009)
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Protein

LRR receptor-like serine/threonine-protein kinase RGI5

Gene

RGI5

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Together with RGI1, RGI2, RGI3 and RGI4, acts as receptor of RGF1, a peptide hormone that maintains the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT) (PubMed:27229312, PubMed:27229311).

Links RGF1 signal with its downstream components (PubMed:27229311).

2 Publications

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei800ATPPROSITE-ProRule annotation1
<p>This subsection describes interesting single amino acid sites on the sequence that are not defined in any other subsection. This subsection can be displayed in different sections ('Function', 'PTM / Processing', 'Pathology and Biotech') according to its content.<p><a href='/help/site' target='_top'>More...</a></p>Sitei800Essential for autophosphorylation activityBy similarity1
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei900Proton acceptorPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi778 – 786ATPPROSITE-ProRule annotation9

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionKinase, Receptor, Serine/threonine-protein kinase, Transferase
LigandATP-binding, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
LRR receptor-like serine/threonine-protein kinase RGI5 (EC:2.7.11.1PROSITE-ProRule annotation)
Alternative name(s):
Protein RECEPTOR OF RGF1 51 Publication
Protein RGF1 INSENSITIVE 51 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:RGI51 Publication
Synonyms:RGFR51 Publication
Ordered Locus Names:At1g34110Imported
ORF Names:F12G12.7Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT1G34110

The Arabidopsis Information Resource

More...
TAIRi
locus:2009071, AT1G34110

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini22 – 706ExtracellularSequence analysisAdd BLAST685
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei707 – 727HelicalSequence analysisAdd BLAST21
Topological domaini728 – 1072CytoplasmicSequence analysisAdd BLAST345

Keywords - Cellular componenti

Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Smaller root meristem size and fewer root meristematic cortex cells, associated with shorter roots and a slighty reduced sensitivity to RGF1 (PubMed:27229311). Quintuple mutants rgi1 rgi2 rgi3 rgi4 rgi5 display a consistent short primary root phenotype with a small size of meristem associated with a total insensitivity to RGF1 and undetectable levels of PLT1 and PLT2 (PubMed:27229312).2 Publications

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 21Sequence analysisAdd BLAST21
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000038752622 – 1072LRR receptor-like serine/threonine-protein kinase RGI5Add BLAST1051

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi56 ↔ 63By similarity
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi80N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi97N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi102N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi176N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi213N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi306N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi354N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi402N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi498N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi546N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi650N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi655N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei764PhosphothreonineBy similarity1
Modified residuei851PhosphotyrosineBy similarity1
Modified residuei887PhosphotyrosineBy similarity1
Modified residuei936PhosphoserineBy similarity1
Modified residuei944PhosphotyrosineBy similarity1
Modified residuei951PhosphotyrosineBy similarity1
Modified residuei952PhosphothreonineBy similarity1

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

Phosphorylated and ubiquitinated upon interaction with RGF1, thus leading to activation a subsequent degradation.By similarity
Autophosphorylated.By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
C0LGF5

PRoteomics IDEntifications database

More...
PRIDEi
C0LGF5

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
242430

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in roots and hypocotyls.1 Publication

<p>This subsection of the 'Expression' section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified 'at the protein level'.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

Present in the whole roots.1 Publication

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
C0LGF5, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
C0LGF5, AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Binds to RGF1; this interaction triggers the formation of heterodimers with SERK1.

1 Publication

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Hide details

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
25542, 27 interactors

Protein interaction database and analysis system

More...
IntActi
C0LGF5, 29 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT1G34110.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
C0LGF5

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati66 – 89LRR 1Sequence analysisAdd BLAST24
Repeati90 – 113LRR 2Sequence analysisAdd BLAST24
Repeati114 – 138LRR 3Sequence analysisAdd BLAST25
Repeati140 – 162LRR 4Sequence analysisAdd BLAST23
Repeati164 – 185LRR 5Sequence analysisAdd BLAST22
Repeati187 – 211LRR 6Sequence analysisAdd BLAST25
Repeati212 – 234LRR 7Sequence analysisAdd BLAST23
Repeati235 – 259LRR 8Sequence analysisAdd BLAST25
Repeati260 – 283LRR 9Sequence analysisAdd BLAST24
Repeati285 – 307LRR 10Sequence analysisAdd BLAST23
Repeati308 – 331LRR 11Sequence analysisAdd BLAST24
Repeati332 – 355LRR 12Sequence analysisAdd BLAST24
Repeati356 – 379LRR 13Sequence analysisAdd BLAST24
Repeati381 – 402LRR 14Sequence analysisAdd BLAST22
Repeati403 – 427LRR 15Sequence analysisAdd BLAST25
Repeati429 – 451LRR 16Sequence analysisAdd BLAST23
Repeati452 – 475LRR 17Sequence analysisAdd BLAST24
Repeati477 – 499LRR 18Sequence analysisAdd BLAST23
Repeati500 – 523LRR 19Sequence analysisAdd BLAST24
Repeati524 – 546LRR 20Sequence analysisAdd BLAST23
Repeati548 – 571LRR 21Sequence analysisAdd BLAST24
Repeati572 – 595LRR 22Sequence analysisAdd BLAST24
Repeati597 – 619LRR 23Sequence analysisAdd BLAST23
Repeati620 – 642LRR 24Sequence analysisAdd BLAST23
Repeati643 – 667LRR 25Sequence analysisAdd BLAST25
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini772 – 1067Protein kinasePROSITE-ProRule annotationAdd BLAST296

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological significance.<p><a href='/help/motif' target='_top'>More...</a></p>Motifi171 – 172Small peptide recognitionBy similarity2
Motifi193 – 196Small peptide recognitionBy similarity4
Motifi216 – 221Small peptide recognitionBy similarity6
Motifi244Small peptide recognitionBy similarity1
Motifi266 – 268Small peptide recognitionBy similarity3
Motifi314 – 317Small peptide recognitionBy similarity4
Motifi336 – 338Small peptide recognitionBy similarity3
Motifi384 – 388Small peptide recognitionBy similarity5
Motifi410 – 413Small peptide recognitionBy similarity4
Motifi432 – 436Small peptide recognitionBy similarity5
Motifi456 – 458Small peptide recognitionBy similarity3

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation

Keywords - Domaini

Leucine-rich repeat, Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG502QSRW, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_000288_22_1_1

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
C0LGF5

Database of Orthologous Groups

More...
OrthoDBi
116688at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
C0LGF5

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.80.10.10, 6 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011009, Kinase-like_dom_sf
IPR001611, Leu-rich_rpt
IPR003591, Leu-rich_rpt_typical-subtyp
IPR032675, LRR_dom_sf
IPR013210, LRR_N_plant-typ
IPR000719, Prot_kinase_dom
IPR017441, Protein_kinase_ATP_BS
IPR008271, Ser/Thr_kinase_AS

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00560, LRR_1, 1 hit
PF13855, LRR_8, 2 hits
PF08263, LRRNT_2, 1 hit
PF00069, Pkinase, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

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SMARTi
View protein in SMART
SM00369, LRR_TYP, 10 hits
SM00220, S_TKc, 1 hit

Superfamily database of structural and functional annotation

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SUPFAMi
SSF56112, SSF56112, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51450, LRR, 16 hits
PS00107, PROTEIN_KINASE_ATP, 1 hit
PS50011, PROTEIN_KINASE_DOM, 1 hit
PS00108, PROTEIN_KINASE_ST, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

C0LGF5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MERERSNFFF LFLFCSWVSM AQPTLSLSSD GQALLSLKRP SPSLFSSWDP
60 70 80 90 100
QDQTPCSWYG ITCSADNRVI SVSIPDTFLN LSSIPDLSSL SSLQFLNLSS
110 120 130 140 150
TNLSGPIPPS FGKLTHLRLL DLSSNSLSGP IPSELGRLST LQFLILNANK
160 170 180 190 200
LSGSIPSQIS NLFALQVLCL QDNLLNGSIP SSFGSLVSLQ QFRLGGNTNL
210 220 230 240 250
GGPIPAQLGF LKNLTTLGFA ASGLSGSIPS TFGNLVNLQT LALYDTEISG
260 270 280 290 300
TIPPQLGLCS ELRNLYLHMN KLTGSIPKEL GKLQKITSLL LWGNSLSGVI
310 320 330 340 350
PPEISNCSSL VVFDVSANDL TGDIPGDLGK LVWLEQLQLS DNMFTGQIPW
360 370 380 390 400
ELSNCSSLIA LQLDKNKLSG SIPSQIGNLK SLQSFFLWEN SISGTIPSSF
410 420 430 440 450
GNCTDLVALD LSRNKLTGRI PEELFSLKRL SKLLLLGNSL SGGLPKSVAK
460 470 480 490 500
CQSLVRLRVG ENQLSGQIPK EIGELQNLVF LDLYMNHFSG GLPYEISNIT
510 520 530 540 550
VLELLDVHNN YITGDIPAQL GNLVNLEQLD LSRNSFTGNI PLSFGNLSYL
560 570 580 590 600
NKLILNNNLL TGQIPKSIKN LQKLTLLDLS YNSLSGEIPQ ELGQVTSLTI
610 620 630 640 650
NLDLSYNTFT GNIPETFSDL TQLQSLDLSS NSLHGDIKVL GSLTSLASLN
660 670 680 690 700
ISCNNFSGPI PSTPFFKTIS TTSYLQNTNL CHSLDGITCS SHTGQNNGVK
710 720 730 740 750
SPKIVALTAV ILASITIAIL AAWLLILRNN HLYKTSQNSS SSPSTAEDFS
760 770 780 790 800
YPWTFIPFQK LGITVNNIVT SLTDENVIGK GCSGIVYKAE IPNGDIVAVK
810 820 830 840 850
KLWKTKDNNE EGESTIDSFA AEIQILGNIR HRNIVKLLGY CSNKSVKLLL
860 870 880 890 900
YNYFPNGNLQ QLLQGNRNLD WETRYKIAIG AAQGLAYLHH DCVPAILHRD
910 920 930 940 950
VKCNNILLDS KYEAILADFG LAKLMMNSPN YHNAMSRVAG SYGYIAPEYG
960 970 980 990 1000
YTMNITEKSD VYSYGVVLLE ILSGRSAVEP QIGDGLHIVE WVKKKMGTFE
1010 1020 1030 1040 1050
PALSVLDVKL QGLPDQIVQE MLQTLGIAMF CVNPSPVERP TMKEVVTLLM
1060 1070
EVKCSPEEWG KTSQPLIKPS SS
Length:1,072
Mass (Da):116,725
Last modified:November 3, 2009 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3A5348584E41C766
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1P8ANP7A0A1P8ANP7_ARATH
Leucine-rich receptor-like protein ...
At1g34110, F12G12.7, F12G12_7
1,069Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAG12526 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
AC015446 Genomic DNA Translation: AAG12526.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE31671.1
FJ708644 mRNA Translation: ACN59240.1

Protein sequence database of the Protein Information Resource

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PIRi
B86465

NCBI Reference Sequences

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RefSeqi
NP_174673.3, NM_103134.4

Genome annotation databases

Ensembl plant genome annotation project

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EnsemblPlantsi
AT1G34110.1; AT1G34110.1; AT1G34110

Database of genes from NCBI RefSeq genomes

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GeneIDi
840310

Gramene; a comparative resource for plants

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Gramenei
AT1G34110.1; AT1G34110.1; AT1G34110

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
ath:AT1G34110

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC015446 Genomic DNA Translation: AAG12526.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE31671.1
FJ708644 mRNA Translation: ACN59240.1
PIRiB86465
RefSeqiNP_174673.3, NM_103134.4

3D structure databases

SMRiC0LGF5
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi25542, 27 interactors
IntActiC0LGF5, 29 interactors
STRINGi3702.AT1G34110.1

Proteomic databases

PaxDbiC0LGF5
PRIDEiC0LGF5
ProteomicsDBi242430

Genome annotation databases

EnsemblPlantsiAT1G34110.1; AT1G34110.1; AT1G34110
GeneIDi840310
GrameneiAT1G34110.1; AT1G34110.1; AT1G34110
KEGGiath:AT1G34110

Organism-specific databases

AraportiAT1G34110
TAIRilocus:2009071, AT1G34110

Phylogenomic databases

eggNOGiENOG502QSRW, Eukaryota
HOGENOMiCLU_000288_22_1_1
InParanoidiC0LGF5
OrthoDBi116688at2759
PhylomeDBiC0LGF5

Miscellaneous databases

Protein Ontology

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PROi
PR:C0LGF5

Gene expression databases

ExpressionAtlasiC0LGF5, baseline and differential
GenevisibleiC0LGF5, AT

Family and domain databases

Gene3Di3.80.10.10, 6 hits
InterProiView protein in InterPro
IPR011009, Kinase-like_dom_sf
IPR001611, Leu-rich_rpt
IPR003591, Leu-rich_rpt_typical-subtyp
IPR032675, LRR_dom_sf
IPR013210, LRR_N_plant-typ
IPR000719, Prot_kinase_dom
IPR017441, Protein_kinase_ATP_BS
IPR008271, Ser/Thr_kinase_AS
PfamiView protein in Pfam
PF00560, LRR_1, 1 hit
PF13855, LRR_8, 2 hits
PF08263, LRRNT_2, 1 hit
PF00069, Pkinase, 1 hit
SMARTiView protein in SMART
SM00369, LRR_TYP, 10 hits
SM00220, S_TKc, 1 hit
SUPFAMiSSF56112, SSF56112, 1 hit
PROSITEiView protein in PROSITE
PS51450, LRR, 16 hits
PS00107, PROTEIN_KINASE_ATP, 1 hit
PS50011, PROTEIN_KINASE_DOM, 1 hit
PS00108, PROTEIN_KINASE_ST, 1 hit

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRGI5_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: C0LGF5
Secondary accession number(s): Q9FX19
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 3, 2009
Last sequence update: November 3, 2009
Last modified: February 10, 2021
This is version 85 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
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