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Protein

Probable LRR receptor-like serine/threonine-protein kinase At1g07560

Gene

At1g07560

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei598ATPPROSITE-ProRule annotation1
Active sitei692Proton acceptorPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi576 – 584ATPPROSITE-ProRule annotation9

GO - Molecular functioni

Keywordsi

Molecular functionKinase, Receptor, Serine/threonine-protein kinase, Transferase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable LRR receptor-like serine/threonine-protein kinase At1g07560 (EC:2.7.11.1)
Gene namesi
Ordered Locus Names:At1g07560
ORF Names:F22G5.6
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G07560
TAIRilocus:2024972 AT1G07560

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini25 – 515ExtracellularSequence analysisAdd BLAST491
Transmembranei516 – 536HelicalSequence analysisAdd BLAST21
Topological domaini537 – 871CytoplasmicSequence analysisAdd BLAST335

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_000038754425 – 871Probable LRR receptor-like serine/threonine-protein kinase At1g07560Add BLAST847

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi143N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi182N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi236N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi258N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi291N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi297N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi407N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi434N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi447N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi466N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi471N-linked (GlcNAc...) asparagineSequence analysis1
Modified residuei561PhosphothreonineBy similarity1
Modified residuei643PhosphotyrosineBy similarity1
Modified residuei696PhosphoserineBy similarity1
Modified residuei726PhosphoserineBy similarity1
Modified residuei727PhosphothreonineBy similarity1
Modified residuei732PhosphothreonineBy similarity1
Modified residuei740PhosphotyrosineBy similarity1

Keywords - PTMi

Glycoprotein, Phosphoprotein

Proteomic databases

PaxDbiC0LGD9
PRIDEiC0LGD9

Expressioni

Gene expression databases

ExpressionAtlasiC0LGD9 baseline and differential
GenevisibleiC0LGD9 AT

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
At1g69990C0LGI52EBI-16902423,EBI-20651225

Protein-protein interaction databases

BioGridi22511, 27 interactors
IntActiC0LGD9, 27 interactors
STRINGi3702.AT1G07560.1

Structurei

3D structure databases

ProteinModelPortaliC0LGD9
SMRiC0LGD9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati413 – 436LRR 1Add BLAST24
Repeati437 – 459LRR 2Add BLAST23
Repeati461 – 482LRR 3Add BLAST22
Domaini570 – 837Protein kinasePROSITE-ProRule annotationAdd BLAST268

Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation

Keywords - Domaini

Leucine-rich repeat, Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IF1S Eukaryota
COG0515 LUCA
HOGENOMiHOG000116550
InParanoidiC0LGD9
OMAiNTSPVKC
OrthoDBiEOG09361214
PhylomeDBiC0LGD9

Family and domain databases

Gene3Di3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR011009 Kinase-like_dom_sf
IPR001611 Leu-rich_rpt
IPR032675 LRR_dom_sf
IPR024788 Malectin-like_Carb-bd_dom
IPR000719 Prot_kinase_dom
IPR017441 Protein_kinase_ATP_BS
IPR008271 Ser/Thr_kinase_AS
PfamiView protein in Pfam
PF13855 LRR_8, 1 hit
PF12819 Malectin_like, 1 hit
PF00069 Pkinase, 1 hit
SMARTiView protein in SMART
SM00220 S_TKc, 1 hit
SUPFAMiSSF56112 SSF56112, 1 hit
PROSITEiView protein in PROSITE
PS00107 PROTEIN_KINASE_ATP, 1 hit
PS50011 PROTEIN_KINASE_DOM, 1 hit
PS00108 PROTEIN_KINASE_ST, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C0LGD9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKNLRGLLLA FLVLSLGISD FLRAQDQQGF ISLDCGLQAD ESPYTEPLTK
60 70 80 90 100
LTFTSDADFI KSGKSGKIQN VPGMEYIKPY TVLRYFPDGV RNCYTLIVIQ
110 120 130 140 150
GTNYLIVAMF TYGNYDNLNT HPKFDLYLGP NIWTTVDLQR NVNGTRAEII
160 170 180 190 200
HIPRSTSLQI CLVKTGTTTP LISALELRPL RNNTYIPQSG SLKTLFRVHL
210 220 230 240 250
TDSKETVRYP EDVHDRLWSP FFMPEWRLLR TSLTVNTSDD NGYDIPEDVV
260 270 280 290 300
VTAATPANVS SPLTISWNLE TPDDLVYAYL HVAEIQSLRE NDTREFNISA
310 320 330 340 350
GQDVNYGPVS PDEFLVGTLF NTSPVKCEGG TCHLQLIKTP KSTLPPLLNA
360 370 380 390 400
IEAFITVEFP QSETNANDVL AIKSIETSYG LSRISWQGDP CVPQQLLWDG
410 420 430 440 450
LTCEYTNMST PPRIHSLDLS SSELTGIIVP EIQNLTELKK LDFSNNNLTG
460 470 480 490 500
GVPEFLAKMK SLLVINLSGN NLSGSVPQAL LNKVKNGLKL NIQGNPNLCF
510 520 530 540 550
SSSCNKKKNS IMLPVVASLA SLAAIIAMIA LLFVCIKRRS SSRKGPSPSQ
560 570 580 590 600
QSIETIKKRY TYAEVLAMTK KFERVLGKGG FGMVYHGYIN GTEEVAVKLL
610 620 630 640 650
SPSSAQGYKE FKTEVELLLR VYHTNLVSLV GYCDEKDHLA LIYQYMVNGD
660 670 680 690 700
LKKHFSGSSI ISWVDRLNIA VDAASGLEYL HIGCKPLIVH RDVKSSNILL
710 720 730 740 750
DDQLQAKLAD FGLSRSFPIG DESHVSTLVA GTFGYLDHEY YQTNRLSEKS
760 770 780 790 800
DVYSFGVVLL EIITNKPVID HNRDMPHIAE WVKLMLTRGD ISNIMDPKLQ
810 820 830 840 850
GVYDSGSAWK ALELAMTCVN PSSLKRPNMS HVVHELKECL VSENNRTRDI
860 870
DTSRSMDINL SFGTDVNPKA R
Length:871
Mass (Da):96,926
Last modified:May 5, 2009 - v1
Checksum:iC56478E3E029ED5F
GO

Sequence cautioni

The sequence AAF79578 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC022464 Genomic DNA Translation: AAF79578.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE28142.1
FJ708628 mRNA Translation: ACN59224.1
PIRiB86210
RefSeqiNP_172236.2, NM_100630.3
UniGeneiAt.51517

Genome annotation databases

EnsemblPlantsiAT1G07560.1; AT1G07560.1; AT1G07560
GeneIDi837270
GrameneiAT1G07560.1; AT1G07560.1; AT1G07560
KEGGiath:AT1G07560

Similar proteinsi

Cross-referencesi

Web resourcesi

PlantP kinase Classification PPC

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC022464 Genomic DNA Translation: AAF79578.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE28142.1
FJ708628 mRNA Translation: ACN59224.1
PIRiB86210
RefSeqiNP_172236.2, NM_100630.3
UniGeneiAt.51517

3D structure databases

ProteinModelPortaliC0LGD9
SMRiC0LGD9
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi22511, 27 interactors
IntActiC0LGD9, 27 interactors
STRINGi3702.AT1G07560.1

Proteomic databases

PaxDbiC0LGD9
PRIDEiC0LGD9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G07560.1; AT1G07560.1; AT1G07560
GeneIDi837270
GrameneiAT1G07560.1; AT1G07560.1; AT1G07560
KEGGiath:AT1G07560

Organism-specific databases

AraportiAT1G07560
TAIRilocus:2024972 AT1G07560

Phylogenomic databases

eggNOGiENOG410IF1S Eukaryota
COG0515 LUCA
HOGENOMiHOG000116550
InParanoidiC0LGD9
OMAiNTSPVKC
OrthoDBiEOG09361214
PhylomeDBiC0LGD9

Miscellaneous databases

PROiPR:C0LGD9

Gene expression databases

ExpressionAtlasiC0LGD9 baseline and differential
GenevisibleiC0LGD9 AT

Family and domain databases

Gene3Di3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR011009 Kinase-like_dom_sf
IPR001611 Leu-rich_rpt
IPR032675 LRR_dom_sf
IPR024788 Malectin-like_Carb-bd_dom
IPR000719 Prot_kinase_dom
IPR017441 Protein_kinase_ATP_BS
IPR008271 Ser/Thr_kinase_AS
PfamiView protein in Pfam
PF13855 LRR_8, 1 hit
PF12819 Malectin_like, 1 hit
PF00069 Pkinase, 1 hit
SMARTiView protein in SMART
SM00220 S_TKc, 1 hit
SUPFAMiSSF56112 SSF56112, 1 hit
PROSITEiView protein in PROSITE
PS00107 PROTEIN_KINASE_ATP, 1 hit
PS50011 PROTEIN_KINASE_DOM, 1 hit
PS00108 PROTEIN_KINASE_ST, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiY1756_ARATH
AccessioniPrimary (citable) accession number: C0LGD9
Secondary accession number(s): Q9LNX9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 3, 2009
Last sequence update: May 5, 2009
Last modified: November 7, 2018
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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Main funding by: National Institutes of Health

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