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Entry version 69 (16 Oct 2019)
Sequence version 2 (11 Dec 2013)
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Protein
Submitted name:

Uncharacterized protein

Gene

POPTR_010G172500

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHydrolaseSAAS annotation
LigandATP-bindingSAAS annotation, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:POPTR_010G172500Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3694 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006729 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 10

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
B9HY36 baseline

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
3694.POPTR_0010s17940.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
B9HY36

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 22DisorderedSequence analysisAdd BLAST22
Regioni51 – 70DisorderedSequence analysisAdd BLAST20
Regioni75 – 357DisorderedSequence analysisAdd BLAST283
Regioni1218 – 1284DisorderedSequence analysisAdd BLAST67

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi95 – 117PolyampholyteSequence analysisAdd BLAST23
Compositional biasi118 – 156PolarSequence analysisAdd BLAST39
Compositional biasi157 – 251PolyampholyteSequence analysisAdd BLAST95
Compositional biasi277 – 291PolarSequence analysisAdd BLAST15
Compositional biasi300 – 333PolarSequence analysisAdd BLAST34
Compositional biasi337 – 357PolyampholyteSequence analysisAdd BLAST21
Compositional biasi1218 – 1261PolyampholyteSequence analysisAdd BLAST44

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0924 Eukaryota
COG1643 LUCA

KEGG Orthology (KO)

More...
KOi
K12815

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011545 DEAD/DEAH_box_helicase_dom
IPR011709 DUF1605
IPR007502 Helicase-assoc_dom
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00270 DEAD, 1 hit
PF04408 HA2, 1 hit
PF00271 Helicase_C, 1 hit
PF07717 OB_NTP_bind, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00487 DEXDc, 1 hit
SM00847 HA2, 1 hit
SM00490 HELICc, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52540 SSF52540, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B9HY36-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDIDKSVVTM EAEQSNGSAG GLFVPKKEKL EFRPPERKSL LGLDVLAIAK
60 70 80 90 100
RGGSDANGGG FKAPKERATT SFMASIDEEE EATESSGLDE VENDGGSESG
110 120 130 140 150
VRRNVNRRYR ETSSSEKSAV TREGSHSNTH GTSRSRENLS SDDCATYTGS
160 170 180 190 200
SRSVKSRSPG SERDDRGRDR KGLKDDARDE SRRGRDRHSS DREERYRGRE
210 220 230 240 250
ARGRYEQEYD GDYGRKRSRY EGSRRTPGRS DWDDGRWEWE ETPRQDSYNT
260 270 280 290 300
SRRHHPSPSP MFVGASPDAR LVSPWMGGQT PRSSGSAASP WDHISPSPVP
310 320 330 340 350
IRASGSSFRS STSKYGGRSH QLTFSTTSAP SLEDGEGDKT YSSEEHNHEI
360 370 380 390 400
TESMRQEMEY NSDRAWYDRE EGNTMFDADS SSFFLGDNAS FQKKEAELAK
410 420 430 440 450
RLVRRDGTKM SLAQSKKLSQ LSADNAQWED RQLMRSGTVR GTEVQTEFDD
460 470 480 490 500
EEEHKVILLV HDTKPPFLDG RVVFTKQAEP IMPLKDPTSD MAIISRKGSA
510 520 530 540 550
LVRETHEKQS MNKSRQRFWE LAGSKLGDIL GVEKTAEQID ADTAAVGEEG
560 570 580 590 600
EIDFKEDAKF AQHMKKGEAV SDFAKSKTLS EQRQYLPIYS VRDELLQVIR
610 620 630 640 650
ENQVIVVVGE TGSGKTTQLT QYLHEDGYTT NGIVGCTQPR RVAAMSVAKR
660 670 680 690 700
VSEEMDTELG DKIGYAIRFE DVTGPNTIIK YMTDGVLLRE TLKDSDLDKY
710 720 730 740 750
RVIVMDEAHE RSLSTDVLFG ILKKVVAQRR DFKLIVTSAT LNAQKFSNFF
760 770 780 790 800
GSVPIFHIPG RTFPVNILYS KSPCEDYVEG AVKQAMTIHI TSPPGDILIF
810 820 830 840 850
MTGQDEIEAA CHALAERMEQ LTSSSKKAVP KLLILPIYSQ LPADLQAKIF
860 870 880 890 900
QNAEDGARKC IVATNIAETS LTVDGIYYVI DTGYGKMKVY NPKMGMDALQ
910 920 930 940 950
VFPVSRAAAD QRAGRAGRTG PGTCYRLYTE SAYLNEMLPS PVPEIQRTNL
960 970 980 990 1000
GNVVLLLKSL KIENLLDFDF MDPPPQDNIL NSMYQLWVLG ALNNVGALTD
1010 1020 1030 1040 1050
LGWKMVEFPL DPPLAKMLLI GEQLGCINEV LTIVSMLSVP SVFFRPKDRV
1060 1070 1080 1090 1100
EESDAAREKF FVPESDHLTL LNVYLQWKEH QYRGDWCNDH FLHVKGLRKA
1110 1120 1130 1140 1150
REVRSQLLDI LKTLKIPLTS CGYDWDVVRK AICSAYFHNS ARLKGVGEYV
1160 1170 1180 1190 1200
NCRNGMPCHL HPSSALYGLG YTPDYVVYHE LILTTKEYMQ CATAVEPQWL
1210 1220 1230 1240 1250
AELGPMFFSV KDSDTSMLEH KRKQKEEKTA MEEEMENLRK VQAETDRESK
1260 1270 1280
EKEREKRAKR QQQVSMPGLK KGSSTYLRPK KFGL
Length:1,284
Mass (Da):144,380
Last modified:December 11, 2013 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iADF64302CB1B23AF
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CM009299 Genomic DNA Translation: PNT17067.1

NCBI Reference Sequences

More...
RefSeqi
XP_002316148.2, XM_002316112.2

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
PNT17067; PNT17067; POPTR_010G172500v3

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
7492959

Gramene; a comparative resource for plants

More...
Gramenei
PNT17067; PNT17067; POPTR_010G172500v3

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
pop:7492959

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM009299 Genomic DNA Translation: PNT17067.1
RefSeqiXP_002316148.2, XM_002316112.2

3D structure databases

SMRiB9HY36
ModBaseiSearch...

Protein-protein interaction databases

STRINGi3694.POPTR_0010s17940.1

Genome annotation databases

EnsemblPlantsiPNT17067; PNT17067; POPTR_010G172500v3
GeneIDi7492959
GrameneiPNT17067; PNT17067; POPTR_010G172500v3
KEGGipop:7492959

Phylogenomic databases

eggNOGiKOG0924 Eukaryota
COG1643 LUCA
KOiK12815

Gene expression databases

ExpressionAtlasiB9HY36 baseline

Family and domain databases

InterProiView protein in InterPro
IPR011545 DEAD/DEAH_box_helicase_dom
IPR011709 DUF1605
IPR007502 Helicase-assoc_dom
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00270 DEAD, 1 hit
PF04408 HA2, 1 hit
PF00271 Helicase_C, 1 hit
PF07717 OB_NTP_bind, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00847 HA2, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiB9HY36_POPTR
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B9HY36
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: December 11, 2013
Last modified: October 16, 2019
This is version 69 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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