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Entry version 54 (16 Oct 2019)
Sequence version 1 (24 Mar 2009)
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Protein

Auxin transport protein BIG

Gene

Os09g0247700

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Required for auxin efflux and polar auxin transport (PAT) influencing auxin-mediated developmental responses (e.g. cell elongation, apical dominance, lateral root production, inflorescence architecture, general growth and development) (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri1431 – 1502UBR-typePROSITE-ProRule annotationAdd BLAST72
Zinc fingeri2468 – 2515ZZ-typePROSITE-ProRule annotationAdd BLAST48
Zinc fingeri3319 – 3359MYND-type; degenerateAdd BLAST41

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDevelopmental protein
Biological processAuxin signaling pathway
LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Auxin transport protein BIG
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:Os09g0247700, LOC_Os09g07294
ORF Names:OJ1451_A02.25, OsJ_28507, P0499G10.6
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOryza sativa subsp. japonica (Rice)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri39947 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000059680 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 9

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei289 – 309HelicalSequence analysisAdd BLAST21
Transmembranei646 – 666HelicalSequence analysisAdd BLAST21
Transmembranei772 – 792HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004107281 – 4965Auxin transport protein BIGAdd BLAST4965

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
B9G2A8

PRoteomics IDEntifications database

More...
PRIDEi
B9G2A8

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
B9G2A8 OS

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
4530.OS09T0247700-01

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
B9G2A8

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the UBR4 family.Curated

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri1431 – 1502UBR-typePROSITE-ProRule annotationAdd BLAST72
Zinc fingeri2468 – 2515ZZ-typePROSITE-ProRule annotationAdd BLAST48
Zinc fingeri3319 – 3359MYND-type; degenerateAdd BLAST41

Keywords - Domaini

Transmembrane, Transmembrane helix, Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1776 Eukaryota
ENOG410XPP8 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000029784

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
B9G2A8

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR016024 ARM-type_fold
IPR025704 E3_Ub_ligase_UBR4
IPR003126 Znf_UBR
IPR000433 Znf_ZZ

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13764 E3_UbLigase_R4, 1 hit
PF00569 ZZ, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00396 ZnF_UBR1, 1 hit
SM00291 ZnF_ZZ, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371 SSF48371, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51157 ZF_UBR, 1 hit
PS01357 ZF_ZZ_1, 1 hit
PS50135 ZF_ZZ_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

B9G2A8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSIMSSINEC LATCKVLISP SMLPLHVLLS VEQVESTVVE IVERSLEFCL
60 70 80 90 100
LYLEKSSYAC EDYGLLNEVA YFMECVLLRG TPSKVYSLEP SVVNDVIEQW
110 120 130 140 150
SSVQVDSERI SPQEKYFCYL KGFNCSNSGD DLQRFRLTLS PECLQQDYVI
160 170 180 190 200
AENTESSHTA SPNGMVSIAQ HFAVVHLHCI PVLLTLVQKL CQSPALDVIE
210 220 230 240 250
DTNFNMRLSF GQRILKLVHG LAMEFPCDAS DAMMLCSVAR CTDSLPVLFK
260 270 280 290 300
LKFKFANHDR VFSGDGVGTV LLQILDEFLQ LIHIIFCNSD ICCTVQVCIL
310 320 330 340 350
ASLLEIFSPE KWKYDRSAAC LMPPLVYSPH IVQYVLKLLN DTKRWTSRVD
360 370 380 390 400
RDRPGKDVLG YSCNSETDGL SCHARSKKVP LLKKYTSEEY LQLIFPSEEQ
410 420 430 440 450
WLDDLVHLIF FLHEEGVKSM PLLEKPQMSC TKQVTLSELE SVASHEEEAL
460 470 480 490 500
FGNLFAEARS TGVADSVEQP ISLGSGPSSS QHGPIQLAAD LICFMKMSIF
510 520 530 540 550
SPEWCTAIYV DACRKFHSNH LEQFLSILQC PAFCSDESIA TTSLSEVNSL
560 570 580 590 600
HINTACFELL QMFLISHECP ASLREDLVDK VFNAENGMYT YNNYTLALVA
610 620 630 640 650
RAIISGASSI YNLGRKVFVQ ENETASTWSK CIWTHKMGFT PVKTPACLAA
660 670 680 690 700
YVVVSGNTSV MVAYEVKIQN EGDILLKEGQ SRSMNDYLPS FTAEVVEGIF
710 720 730 740 750
ADTVKEYAST SSLFPQLIDV TPAHAEIYFD KSALEALGLN FANLGSNISE
760 770 780 790 800
ILGVWKGRKA EVAEDLIAER YLFLICWSTL SGIGYSGGYE GLLNPDFADV
810 820 830 840 850
NFFISFALSV SDDASSLLDA NLPSVIFGFL KLLQSEILCG PSVLESWDFL
860 870 880 890 900
RKGAWLSLIL SLINTGFWGH QTSGKPDVDL QGKQVVQDAE IFGKSLLTFI
910 920 930 940 950
SENSGHCLHV LSSLLETYLH AFKEAFISFV VEKGRVCEDH CYPSWLLKHS
960 970 980 990 1000
AFDKSKHPLL FEKVGSNIGM LEPICDLSSR IDRVATKLGD GRKEYFLLKC
1010 1020 1030 1040 1050
LLHGFPVNSA SNNSAILSCV LVINEIIYML NGCIKIMQPN DRDLVDVGVI
1060 1070 1080 1090 1100
SKLLSMIMTI KSDGMFTSIH KLCDSIFMSL IDQKDDLAGY SDLFVLKQLE
1110 1120 1130 1140 1150
GYLADINSKE IMDNEVKEII VFTIVDLVED LRSKTNVFKF FLGEAEGAPE
1160 1170 1180 1190 1200
RANSLFALEQ ADMSVFIDVL DKCQSEQVNL KILNLFTDIL GDGLCPDLKQ
1210 1220 1230 1240 1250
KLQHKFIGMD VSCFSSWLEF RTLGHSMKIE STNSTTSGPT ALRELTMDFL
1260 1270 1280 1290 1300
MRLTCPSSET LAKELQHHLF DSMLLLLDKA FMSCDLQIVK AHFHFIAQLS
1310 1320 1330 1340 1350
TDESHFKELF EKTLKLMENM VGNEGLLHTL KFLFTCVESV FGDAGSNRSA
1360 1370 1380 1390 1400
LKRLSSKSSG NSFGSGSLIP KQLKNSDSLV LRTNQESNST VDCDASSGEE
1410 1420 1430 1440 1450
DEDDGTSDGE LVSIDRDEEE DGNSERALAT KVCTFTSSGS NFMEQHWYFC
1460 1470 1480 1490 1500
YTCDLTVSKG CCSVCAKVCH QGHRVVYSRS SRFFCDCGAG GVRGSSCQCL
1510 1520 1530 1540 1550
KPRKFTGTSS VSPPVTSSFQ PILPYHEDVE PVADSGSDFE DDISTEAENC
1560 1570 1580 1590 1600
IKLSVPKGFS DELPVFLKNL DVEVRMLELC KKLLPMILSQ RELNLLKDRK
1610 1620 1630 1640 1650
VFLGGEMPMS QASDIFQLKK AFKSGSLDLK IKADYPNSRE LKSHLANGSL
1660 1670 1680 1690 1700
TKSLLSISIR GKLAVGEGDK VAIFDVGQII GQPTAAPITA DKTNVKPLSR
1710 1720 1730 1740 1750
NIVRFEIVHL IFNPLVEHYL SVAGYEDCQV LTLNSRGEVT DRLAIELALQ
1760 1770 1780 1790 1800
GAYIRCVEWV PGSQVQLMVV TNKFVKIYDL SQDNISPLHY FTVADDIIVD
1810 1820 1830 1840 1850
ATLVPSSMGK LVLLVLSEGG LLYRLNVALA GDVGAKTLTD TVLVKDAVSM
1860 1870 1880 1890 1900
HKGLSLYFSS TYRLLFVSHQ DGTTYMGRLD GDSSSITELS YICENDQDGK
1910 1920 1930 1940 1950
SKPAGLYRWR ELIAGSGALA CLSKFKSNSP LAVSLGPHEL FAHNMRHASG
1960 1970 1980 1990 2000
SNAPVVGIAA YKPLSKDKAH CLLLYDDGSL NIYSHTPNGS DSSTTLTAEQ
2010 2020 2030 2040 2050
TKKLGSSILS SRAYAGTKPE FPLDFFEKTT CITCDVKFNS DTTKSSDSES
2060 2070 2080 2090 2100
IKQRLSSDDG YLESLTSAGF KVTISNPNPD IVMVGCRIHV GNTSASNIPS
2110 2120 2130 2140 2150
EITIFHRVIK LDEGMRSWYD IPFTTAESLL ADEEFTIVVG RTFDGSSIPR
2160 2170 2180 2190 2200
IDSIEVYGRA KDEFGWKEKM DAALDMEAHV LGGSSASGKS GKKAQTMQAA
2210 2220 2230 2240 2250
PIQEQVLADA LRILSRIYLL CQPGFCTDTI DADMELNNLK CRSLLETIFQ
2260 2270 2280 2290 2300
SDREPLLHSA ACRVLQAVFP KKEIYYHVKD TMRLLGVIKS LPSITSRIGV
2310 2320 2330 2340 2350
GGAASSWVTK EFIAQIHTVS KVAVHRKSNL ASFLETHGTE LVDGLMQVFW
2360 2370 2380 2390 2400
GILDLDRPDT QRINSLVVPC VEFIYSYAEC LALHSNEKSG VSVAPAVALL
2410 2420 2430 2440 2450
KKLLFAPYEA VQTSSSLAIS SRFLQVPFPK QTMIANDDAP DNHAKASAAS
2460 2470 2480 2490 2500
NSTTGNAQVM IEEDPATSSV QYCCDGCSTV PILRRRWHCN ICPDFDLCET
2510 2520 2530 2540 2550
CYEILDADRL PAPHSRDHPM SAIPIELDTF GGEGNEIHFS VDELTDSSVL
2560 2570 2580 2590 2600
QAPADRTIQT SPSSIHVLDA SESVDFHGSM TEQRTVSISA SKRAINSLLL
2610 2620 2630 2640 2650
SRLIEELSGW METTAGTRAI PIMQLFYRLS SAVGGPFMDS TKPENLDLEK
2660 2670 2680 2690 2700
FVKWLIDEIN ISKPFPAKTR CSFGEVSILV FMFFTLMFRN WHQPGTDGSH
2710 2720 2730 2740 2750
SKSGGSSDLT EKGPVHVQVS TTTLQSSNDD HDKNEFASQL IRACSALRQQ
2760 2770 2780 2790 2800
SFLNYLMDIL QQLVHVFKSS SINGEGGSSS SGCGSLLTVR RELPAGNFSP
2810 2820 2830 2840 2850
FFSDSYAKSH PTDLFMDYYK LLLENTFRLV YSMVRPEKEK SADKDKSCKV
2860 2870 2880 2890 2900
PNTKDLKLDG YQDVLCSYIS NAHTTFVRRY ARRLFLHLCG SKTHYYSVRD
2910 2920 2930 2940 2950
SWQYSHEVKK LHKIINKSGG FRNPVPYERS VKLIKCLSTL CDVAASRPRN
2960 2970 2980 2990 3000
WQKFCLKHTD LLPFLMDNFY YFSEECIVQT LKLLNLAFYS GKDANHNAQK
3010 3020 3030 3040 3050
TESGDIGSST RTGSQSSDSK KKRKGDDSSE GSSEKSCMDM EQAVVVFTGK
3060 3070 3080 3090 3100
DGDVLKRFVD TFLLEWNSTS VRHEAKSVLF GLWYHAKSSF KENMLTTLLQ
3110 3120 3130 3140 3150
KVKYLPMYGQ NIIEYTDLMT CLLGKANDST AKQSDTELLN KCLTSDVVSC
3160 3170 3180 3190 3200
IFDTLHSQNE LLANHPNSRI YNTLSCLVEF DGYYLESEPC VTCSCPDVPY
3210 3220 3230 3240 3250
SRMKLESLKS ETKFTDNRII VKCTGSFTIQ SVTMNVYDAR KSKSVKVLNL
3260 3270 3280 3290 3300
YYNNRPVTDL SELKNNWSLW KRAKSCHLTF NQTELKVEFP IPITACNFMI
3310 3320 3330 3340 3350
ELDSFYENLQ ASSLESLQCP RCSRSVTDKH GICSNCHENA YQCRQCRNIN
3360 3370 3380 3390 3400
YENLDSFLCN ECGYSKYGRF EFHFMAKPSF SFDNMENDDD MRKGLTAIES
3410 3420 3430 3440 3450
ESENAHRRYQ QLMGFKKPLI KLVSSIGEQE IDSQQKDAVQ QMMVSLPGPT
3460 3470 3480 3490 3500
GKVNRKIALL GVLYGEKCKA AFDSVSKSVQ TLQGLRRVLM TYLHQKNSND
3510 3520 3530 3540 3550
TDALPACSIP RSPSSCYGCS TTFVTQCLEL LQVLSKHATS RKQLVSAGIL
3560 3570 3580 3590 3600
SELFENNIHQ GPRTARTLAR AVLSSFSEGD ADAVQELNNL IQKKVMYCLE
3610 3620 3630 3640 3650
HHRSMDISQS TREELLLLSE TCALVDEFWE ARLRVAFQLL FSSIKVGAKH
3660 3670 3680 3690 3700
PAISEHIILP CLRIISQACT PPKSDSGEKE PGMGKSSLMQ AKNDDTVGHS
3710 3720 3730 3740 3750
VTNLSTSKTQ SELSGKIPDG SRRRQDISLL SYSEWESGAS YLDFVRRQYK
3760 3770 3780 3790 3800
VSQAVKGLQK TRHDSQKSDY LVLKYGLRWK RRACRKSSKG DFSKFALGSW
3810 3820 3830 3840 3850
VSDLILSSCS QSIRSEICTL ISLLCPSNSS RQFQLLNLLM SLLPRTLSAG
3860 3870 3880 3890 3900
ESAAEYFELL GTMIDTEASR LFLTVRGCLT TLCSLITKEV SNVESQERSL
3910 3920 3930 3940 3950
SIDISQGFIL HKLVELLNKF LEIPNIRARF MSDNLLSDVL EAFLVIRGLV
3960 3970 3980 3990 4000
VQKTKLINDC NRLLKDLLDS LLVESTANKR QFIRACISGL QKHVKEKKRR
4010 4020 4030 4040 4050
TSLFILEQLC NLICPVKPEP VYLLILNKAH TQEEFIRGSM TRNPYSSAEI
4060 4070 4080 4090 4100
GPLMRDVKNK ICHQLDLIGL LEDDYGMELL VAGNIISLDL SISQVYEQVW
4110 4120 4130 4140 4150
RKHHGQTQHS LSNASQLSAA ASSVRDCPPM TVTYRLQGLD GEATEPMIKE
4160 4170 4180 4190 4200
LEDEREESQD PEVEFAIAGA VRECGGLEII LSMIQSLRED ELRSNQEELG
4210 4220 4230 4240 4250
SVLNLLKYCC KIRENRCALL RLGALGLLLE TARRAFSVDA MEPAEGILLI
4260 4270 4280 4290 4300
VESLTMEANE SDISIAQSVF TTTTEETGAG EEAKKIVLMF LERLCPPDGA
4310 4320 4330 4340 4350
KKSNKQQRNE EMVARILPNL TYGEPAAMEA LVLHFEPYLM NWSEFDQLQK
4360 4370 4380 4390 4400
QHEENPKDET LSKNASMQRS AVENFVRVSE SLKTSSCGER LKEIILEKGI
4410 4420 4430 4440 4450
TKAAVGHLRE SFASAGQASF RTSAEWTVGL KLPSIPLILS MLKGLAKGDL
4460 4470 4480 4490 4500
PTQKCVDEED ILPLLHALEG VPGENEIGAR AENLLDTLAN KENNGDGFLA
4510 4520 4530 4540 4550
EKIQELRHAT RDEMRRRALK KREMLLQGLG MRQEFASDGG RRIVVSQPII
4560 4570 4580 4590 4600
EGLDDVEEEE DGLACMVCRE GYTLRPTDML GVYAFSKRVN LGATSSGSGR
4610 4620 4630 4640 4650
GDCVYTTVSH FNIIHYQCHQ EAKRADAALK NPKKEWDGAT LRNNETLCNC
4660 4670 4680 4690 4700
IFPLRGPSVP PGQYTRCLDQ YWDQLNSLGR ADGSRLRLLT YDIVLMLARF
4710 4720 4730 4740 4750
ATGASFSTDC KGGGRESNSR FLPFMIQMAS HLVDGSANQQ RHVMAKAVTS
4760 4770 4780 4790 4800
YLSSSPSTPE SPVRLSALSG ARGGSGSSEE TVQFMMVNSL LSESYESWLQ
4810 4820 4830 4840 4850
HRPAFLQRGI YHAYMQHKHG RSTLKLSADT SSSAVRSDEG SSADSNDSKR
4860 4870 4880 4890 4900
LFAIVQPMLV YTGLIEQLQQ FFKKGKSSGT QKVGEKDGSS GGNLEAWEIM
4910 4920 4930 4940 4950
MKEKLGNMKE MLGFSKDVLS WLEDMTSSED LQEAFDVMGA LPDVFSGGHT
4960
TCEDFVRAII HGAKS
Length:4,965
Mass (Da):552,028
Last modified:March 24, 2009 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i24E05E512D8EB9E9
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0P0XJE2A0A0P0XJE2_ORYSJ
Os09g0247700 protein
Os09g0247700, OSNPB_090247700
64Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BAD23392 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence BAD25995 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence BAF24578 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
AP005571 Genomic DNA Translation: BAD23392.1 Sequence problems.
AP005587 Genomic DNA Translation: BAD25995.1 Sequence problems.
AP008215 Genomic DNA Translation: BAF24578.1 Sequence problems.
AP014965 Genomic DNA No translation available.
CM000146 Genomic DNA Translation: EEE69254.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005571 Genomic DNA Translation: BAD23392.1 Sequence problems.
AP005587 Genomic DNA Translation: BAD25995.1 Sequence problems.
AP008215 Genomic DNA Translation: BAF24578.1 Sequence problems.
AP014965 Genomic DNA No translation available.
CM000146 Genomic DNA Translation: EEE69254.1

3D structure databases

SMRiB9G2A8
ModBaseiSearch...

Protein-protein interaction databases

STRINGi4530.OS09T0247700-01

Proteomic databases

PaxDbiB9G2A8
PRIDEiB9G2A8

Phylogenomic databases

eggNOGiKOG1776 Eukaryota
ENOG410XPP8 LUCA
HOGENOMiHOG000029784
InParanoidiB9G2A8

Gene expression databases

GenevisibleiB9G2A8 OS

Family and domain databases

InterProiView protein in InterPro
IPR016024 ARM-type_fold
IPR025704 E3_Ub_ligase_UBR4
IPR003126 Znf_UBR
IPR000433 Znf_ZZ
PfamiView protein in Pfam
PF13764 E3_UbLigase_R4, 1 hit
PF00569 ZZ, 1 hit
SMARTiView protein in SMART
SM00396 ZnF_UBR1, 1 hit
SM00291 ZnF_ZZ, 1 hit
SUPFAMiSSF48371 SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS51157 ZF_UBR, 1 hit
PS01357 ZF_ZZ_1, 1 hit
PS50135 ZF_ZZ_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiBIG_ORYSJ
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B9G2A8
Secondary accession number(s): Q6K4G1
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 28, 2011
Last sequence update: March 24, 2009
Last modified: October 16, 2019
This is version 54 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
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