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Protein
Submitted name:

Transcription factor HES-1

Gene

HES1

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor HES-1Imported
Submitted name:
transcription factor HES-1-likeImported
Gene namesi
Name:HES1Imported
Synonyms:LOC106613513Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliB9EQJ3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 102BHLHInterPro annotationAdd BLAST58
Domaini121 – 154OrangeInterPro annotationAdd BLAST34

Phylogenomic databases

HOVERGENiHBG005960
KOiK06054

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR003650 Orange_dom
PfamiView protein in Pfam
PF07527 Hairy_orange, 1 hit
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SM00511 ORANGE, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
PS51054 ORANGE, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

B9EQJ3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MCGRDISDGQ KMPADMMEKN SSSPVAATPA SMNTTPDKPK TASEHRKSSK
60 70 80 90 100
PIMEKRRRAR INESLGQLKT LILDALKKDS SRHSKLEKAD ILEMTVKHLR
110 120 130 140 150
NLQRAQMTAA LNTDPTVLGK YRAGFSECTN EVTRFLSTCE GVNTEVRTRL
160 170 180 190 200
LGHLASCMTQ INAMNYPTQH QISAGPPHPS FGQSMVQMPN SSPQGNVMPL
210 220 230 240 250
PCKGGSPQSM SPEATKVYGG FQLVPATDGQ FAFLIPNAAF APNGPVIPVY
260 270
ANQVNTPVPA AVSPGAPTGN SDSVWRPW
Length:278
Mass (Da):30,030
Last modified:March 24, 2009 - v1
Checksum:iD7DC52E3FCB18823
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
B9EMX1B9EMX1_SALSA
Transcription factor HES-1
HES1 LOC106568808
267Annotation score:
B5X993B5X993_SALSA
Transcription factor HES-1
HES1 LOC106572133
290Annotation score:
B5X6S2B5X6S2_SALSA
Transcription factor HES-1
HES1 LOC106567371
289Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT057918 mRNA Translation: ACM09790.1
RefSeqiXP_014071333.1, XM_014215858.1
UniGeneiSsa.17549

Genome annotation databases

GeneIDi106613513
KEGGisasa:106613513

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT057918 mRNA Translation: ACM09790.1
RefSeqiXP_014071333.1, XM_014215858.1
UniGeneiSsa.17549

3D structure databases

ProteinModelPortaliB9EQJ3
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106613513
KEGGisasa:106613513

Phylogenomic databases

HOVERGENiHBG005960
KOiK06054

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR003650 Orange_dom
PfamiView protein in Pfam
PF07527 Hairy_orange, 1 hit
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SM00511 ORANGE, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
PS51054 ORANGE, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB9EQJ3_SALSA
AccessioniPrimary (citable) accession number: B9EQJ3
Entry historyiIntegrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: February 28, 2018
This is version 53 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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