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Entry version 98 (02 Jun 2021)
Sequence version 1 (24 Mar 2009)
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Protein

E3 ubiquitin ligase PQT3-like

Gene

At5g47430

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

  • S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.By similarity EC:2.3.2.27

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri210 – 224CCHC-typePROSITE-ProRule annotationAdd BLAST15
Zinc fingeri295 – 333RING-type; degeneratePROSITE-ProRule annotationAdd BLAST39

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionTransferase
Biological processUbl conjugation pathway
LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
E3 ubiquitin ligase PQT3-like (EC:2.3.2.27By similarity)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:At5g47430Imported
ORF Names:MQL5.29Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT5G47430

The Arabidopsis Information Resource

More...
TAIRi
locus:2171569, AT5G47430

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004385841 – 892E3 ubiquitin ligase PQT3-likeAdd BLAST892

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei285PhosphoserineCombined sources1
Modified residuei404PhosphoserineCombined sources1
Modified residuei866PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
B9DFV2

PRoteomics IDEntifications database

More...
PRIDEi
B9DFV2

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
234839 [B9DFV2-1]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
B9DFV2

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
B9DFV2, baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
3702.AT5G47430.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
B9DFV2

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini3 – 76DWNNPROSITE-ProRule annotationAdd BLAST74

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni375 – 408DisorderedSequence analysisAdd BLAST34
Regioni459 – 493DisorderedSequence analysisAdd BLAST35
Regioni623 – 892DisorderedSequence analysisAdd BLAST270

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological significance.<p><a href='/help/motif' target='_top'>More...</a></p>Motifi693 – 700Nuclear localization signalPROSITE-ProRule annotation8

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi388 – 408Polar residuesSequence analysisAdd BLAST21
Compositional biasi623 – 641Basic and acidic residuesSequence analysisAdd BLAST19
Compositional biasi646 – 664Polar residuesSequence analysisAdd BLAST19
Compositional biasi671 – 768Basic and acidic residuesSequence analysisAdd BLAST98
Compositional biasi806 – 827Polar residuesSequence analysisAdd BLAST22
Compositional biasi834 – 859Basic and acidic residuesSequence analysisAdd BLAST26
Compositional biasi876 – 892Basic and acidic residuesSequence analysisAdd BLAST17

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri210 – 224CCHC-typePROSITE-ProRule annotationAdd BLAST15
Zinc fingeri295 – 333RING-type; degeneratePROSITE-ProRule annotationAdd BLAST39

Keywords - Domaini

Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0314, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_015100_2_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
B9DFV2

Identification of Orthologs from Complete Genome Data

More...
OMAi
NERRTEG

Database for complete collections of gene phylogenies

More...
PhylomeDBi
B9DFV2

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR014891, DWNN_domain
IPR033489, RBBP6
IPR025829, Zn_knuckle_CX2CX3GHX4C
IPR036875, Znf_CCHC_sf
IPR013083, Znf_RING/FYVE/PHD

The PANTHER Classification System

More...
PANTHERi
PTHR15439, PTHR15439, 2 hits

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF08783, DWNN, 1 hit
PF13696, zf-CCHC_2, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01180, DWNN, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF57756, SSF57756, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51282, DWNN, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 3 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: B9DFV2-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAIYYKFKSA RDYDTIAMDG PFISVGILKD KIFETKHLGT GKDLDIVVSN
60 70 80 90 100
AQTNEEYLDE AMLIPKNTSV LIRRVPGRPR ITVITTQEPR IQNKVEDVQA
110 120 130 140 150
ETTNFPVADP SAAEFPEDEY DEFGTDLYSI PDTQDAQHII PRPHLATADD
160 170 180 190 200
KVDEESKIQA LIDTPALDWQ QRQGQDTFGA GRGYGRGMPG RMNGRGFGME
210 220 230 240 250
RKTPPPGYVC HRCNIPGHFI QHCPTNGDPN YDVKRVKPPT GIPKSMLMAT
260 270 280 290 300
PDGSYSLPSG AVAVLKPNED AFEKEMEGLP STTRSVGELP PELKCPLCKE
310 320 330 340 350
VMKDAALTSK CCYKSFCDKC IRDHIISKSM CVCGRSDVLA DDLLPNKTLR
360 370 380 390 400
DTINRILEAG NDSTENVGSV GHIPDLESAR CPPPKALSPT TSVASKGEKK
410 420 430 440 450
PVLSNNNDAS TLKAPMEVAE ITSAPRASAE VNVEKPVDAC ESTQGSVIVK
460 470 480 490 500
EATVSKLNTQ APKEEMQQQV AAGEPGKKKK KKPRVPGNDM QWNPVPDLAG
510 520 530 540 550
PDYMMQMGPG PQYFNGMQPG FNGVQPGFNG VQPGFNGFHP GFNGFGGPFP
560 570 580 590 600
GAMPPFMGYG LNPMDMGFGG GMNMMHPDPF MAQGFGFPNI PPPHRDLAEM
610 620 630 640 650
GNRMNLQRAM MGRDEAEARN AEMLRKRENE RRPEGGKMFR DGENSRMMMN
660 670 680 690 700
NGTSASASSI NPNKSRQAPP PPIHDYDRRR RPEKRLSPEH PPTRKNISPS
710 720 730 740 750
RDSKRKSERY PDERDRQRDR ERSRHQDVDR EHDRTRDRRD EDRSRDHRHH
760 770 780 790 800
RGETERSQHH HRKRSEPPSS EPPVPATKAE IENNLKSSVF ARISFPEEET
810 820 830 840 850
SSGKRRKVPS SSSTSVTDPS ASASAAAAVG TSVHRHSSRK EIEVADYESS
860 870 880 890
DEDRHFKRKP SRYARSPPVV VSDVSEDKLR YSKRGKGERS RA
Length:892
Mass (Da):99,083
Last modified:March 24, 2009 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i5BB66BD2C7A62C10
GO
Isoform 2 (identifier: B9DFV2-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-61: Missing.

Show »
Length:831
Mass (Da):92,210
Checksum:iD47BA5139EE4972C
GO
Isoform 3 (identifier: B9DFV2-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     196-198: Missing.

Show »
Length:889
Mass (Da):98,822
Checksum:i644DD12470D16B3E
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1P8BBL5A0A1P8BBL5_ARATH
DWNN domain, a CCHC-type zinc finge...
MQL5.29 MQL5_29, At5g47430
905Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A178UBX9A0A178UBX9_ARATH
DWNN domain, a CCHC-type zinc finge...
MQL5.29 MQL5_29, At5g47430
720Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A178UD59A0A178UD59_ARATH
DWNN domain, a CCHC-type zinc finge...
MQL5.29 MQL5_29, At5g47430
733Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BAB11612 differs from that shown. Reason: Erroneous gene model prediction.Curated

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0586841 – 61Missing in isoform 2. Add BLAST61
Alternative sequenceiVSP_058685196 – 198Missing in isoform 3. 3

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AB018117, AB025628 Genomic DNA Translation: BAB11612.1 Sequence problems.
CP002688 Genomic DNA Translation: AED95508.1
CP002688 Genomic DNA Translation: AED95509.1
CP002688 Genomic DNA Translation: AED95510.1
AK316913 mRNA Translation: BAH19619.1
AY128390 mRNA Translation: AAM91593.1

NCBI Reference Sequences

More...
RefSeqi
NP_001078725.1, NM_001085256.1 [B9DFV2-2]
NP_001190484.1, NM_001203555.1 [B9DFV2-3]
NP_199554.2, NM_124114.4 [B9DFV2-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT5G47430.1; AT5G47430.1; AT5G47430 [B9DFV2-1]
AT5G47430.2; AT5G47430.2; AT5G47430 [B9DFV2-2]
AT5G47430.3; AT5G47430.3; AT5G47430 [B9DFV2-3]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
834790

Gramene; a comparative resource for plants

More...
Gramenei
AT5G47430.1; AT5G47430.1; AT5G47430 [B9DFV2-1]
AT5G47430.2; AT5G47430.2; AT5G47430 [B9DFV2-2]
AT5G47430.3; AT5G47430.3; AT5G47430 [B9DFV2-3]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT5G47430

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB018117, AB025628 Genomic DNA Translation: BAB11612.1 Sequence problems.
CP002688 Genomic DNA Translation: AED95508.1
CP002688 Genomic DNA Translation: AED95509.1
CP002688 Genomic DNA Translation: AED95510.1
AK316913 mRNA Translation: BAH19619.1
AY128390 mRNA Translation: AAM91593.1
RefSeqiNP_001078725.1, NM_001085256.1 [B9DFV2-2]
NP_001190484.1, NM_001203555.1 [B9DFV2-3]
NP_199554.2, NM_124114.4 [B9DFV2-1]

3D structure databases

SMRiB9DFV2
ModBaseiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G47430.1

PTM databases

iPTMnetiB9DFV2

Proteomic databases

PaxDbiB9DFV2
PRIDEiB9DFV2
ProteomicsDBi234839 [B9DFV2-1]

Genome annotation databases

EnsemblPlantsiAT5G47430.1; AT5G47430.1; AT5G47430 [B9DFV2-1]
AT5G47430.2; AT5G47430.2; AT5G47430 [B9DFV2-2]
AT5G47430.3; AT5G47430.3; AT5G47430 [B9DFV2-3]
GeneIDi834790
GrameneiAT5G47430.1; AT5G47430.1; AT5G47430 [B9DFV2-1]
AT5G47430.2; AT5G47430.2; AT5G47430 [B9DFV2-2]
AT5G47430.3; AT5G47430.3; AT5G47430 [B9DFV2-3]
KEGGiath:AT5G47430

Organism-specific databases

AraportiAT5G47430
TAIRilocus:2171569, AT5G47430

Phylogenomic databases

eggNOGiKOG0314, Eukaryota
HOGENOMiCLU_015100_2_0_1
InParanoidiB9DFV2
OMAiNERRTEG
PhylomeDBiB9DFV2

Miscellaneous databases

Protein Ontology

More...
PROi
PR:B9DFV2

Gene expression databases

ExpressionAtlasiB9DFV2, baseline and differential

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR014891, DWNN_domain
IPR033489, RBBP6
IPR025829, Zn_knuckle_CX2CX3GHX4C
IPR036875, Znf_CCHC_sf
IPR013083, Znf_RING/FYVE/PHD
PANTHERiPTHR15439, PTHR15439, 2 hits
PfamiView protein in Pfam
PF08783, DWNN, 1 hit
PF13696, zf-CCHC_2, 1 hit
SMARTiView protein in SMART
SM01180, DWNN, 1 hit
SUPFAMiSSF57756, SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS51282, DWNN, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPQT3L_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B9DFV2
Secondary accession number(s): A8MRK5
, F4JX50, Q8L7L2, Q9FHH9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 30, 2016
Last sequence update: March 24, 2009
Last modified: June 2, 2021
This is version 98 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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