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Protein
Submitted name:

Carbohydrate binding family 6

Gene

Mpal_0078

Organism
Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Enzyme and pathway databases

BioCyciMPAL521011:G1GUJ-81-MONOMER

Protein family/group databases

CAZyiCBM6 Carbohydrate-Binding Module Family 6

Names & Taxonomyi

Protein namesi
Submitted name:
Carbohydrate binding family 6Imported
Gene namesi
Ordered Locus Names:Mpal_0078Imported
OrganismiMethanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)Imported
Taxonomic identifieri521011 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaStenosarchaea groupMethanomicrobiaMethanomicrobialesMethanoregulaceaeMethanosphaerula
Proteomesi
  • UP000002457 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi521011.Mpal_0078

Structurei

3D structure databases

ProteinModelPortaliB8GIC1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini282 – 405CBM6InterPro annotationAdd BLAST124
Domaini448 – 585CBM6InterPro annotationAdd BLAST138
Domaini648 – 785CBM6InterPro annotationAdd BLAST138
Domaini871 – 1008CBM6InterPro annotationAdd BLAST138
Domaini1096 – 1234CBM6InterPro annotationAdd BLAST139

Phylogenomic databases

eggNOGiarCOG09007 Archaea
ENOG410Y6YC LUCA
OrthoDBiPOG093Z01GF

Family and domain databases

Gene3Di2.60.120.260, 5 hits
3.40.50.1110, 1 hit
InterProiView protein in InterPro
IPR006584 Cellulose-bd_IV
IPR005084 CMB_fam6
IPR008979 Galactose-bd-like_sf
IPR013830 SGNH_hydro
IPR036514 SGNH_hydro_sf
PfamiView protein in Pfam
PF03422 CBM_6, 5 hits
PF13472 Lipase_GDSL_2, 1 hit
SMARTiView protein in SMART
SM00606 CBD_IV, 5 hits
SUPFAMiSSF49785 SSF49785, 5 hits
PROSITEiView protein in PROSITE
PS51175 CBM6, 5 hits

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

B8GIC1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRSEILCCYI VLAMLLGGSL LVIHADATVN ILPLGDSITR GGTTADSPYP
60 70 80 90 100
SYRYLLWNYL KTGGYDVNFI GSTTFPTFSS FSFDQNHEGH GGYTTGMELA
110 120 130 140 150
GDSSDDPSAK LSNWLKLYTP DIVLLHIGTN DVIQQVPLAT RLSNDAQIID
160 170 180 190 200
TLRADNPNVK ILIAQIIPTS DSFRNTNSQL IAYNNALPAL AAQKSTAQSP
210 220 230 240 250
VIVVDQYTGY NGFSDNQYDG IHPQTSGEKK MADRWYAALV PLLSGGTTVE
260 270 280 290 300
PTPVPTSAPW DSPQAIPGSI QATDYASGGE GVAYHDTTTG NQGGAYRNDD
310 320 330 340 350
VDIEYSSVEQ EFVVAYIRSG EWLTYDVNIA SGGIYTVNFR VSSPNTGSTI
360 370 380 390 400
DLEVDGSEVT MIQVPNTGSF DTYTAVQRPV YLPSGHHTLK LDFSGSSNVN
410 420 430 440 450
YLKFTTGMPT PVPTGTTVSP TPTGSQTITP TVTPTGVERA YVSHTFPCKV
460 470 480 490 500
EAEDYDLGGE GIAYHDTTPG NLGGEYRSDD VDIEAMSGGG SNVGYIKNGE
510 520 530 540 550
WLAYTVSVPV TRTYVATFKS SSWAPGRSIL VQVDGTPVTA VGVPNTNSSN
560 570 580 590 600
VYDSAQVALP MTQGMHRITL TFNGDCQNLD WFDVTNDMPT TVTTPVPTTV
610 620 630 640 650
VTTVPTTIVT TKPTTTTTTV PTTAPTTVVT TVKPTQTSLP YVAHRPPIRV
660 670 680 690 700
EAEDYDQGGE GVAYHDTTLG NLGGQYRQDD VDIETIAAGG YDVGYIKDGE
710 720 730 740 750
WLTYTIDAPS TSAYTAVFRM ASWGAGRSIG VSVDGVQVTT VPVAMTGSYS
760 770 780 790 800
TFTLSAASFT MTQGTHKVRL TFNGDSQNLD YFDLIPGNYA PTTTTVTPVP
810 820 830 840 850
TTVMTTATVT TTAATTTVPT TTPTTTVPTT VVTTGTTTVT TTAATTTVPT
860 870 880 890 900
TAVTTVTTTP APSGTVWQIP THIEAEDYDQ GGEGVAYHDT TLGNLGGQYR
910 920 930 940 950
QDDVDIEAIS GGGYDVCYIR DGEWLRYHIT VQNTGIYTAT FRVGSWNQGR
960 970 980 990 1000
AITIGVDGVG VAVAAVPNTG SSSAYTTTAV AVPLAAGDHM LTLTFNGDGQ
1010 1020 1030 1040 1050
NLDWFTLGNG VIQTTTPTTV APTTAPTTVP TTVVTTVKPT TTVTTVTPTT
1060 1070 1080 1090 1100
MATTVKPTTV VTTTISPTIP TIPVSTTATT LPLPDTKAYT SLSLPGRLQA
1110 1120 1130 1140 1150
ENYDNGGEGV GYHDTTPSNQ GGAYRNDDAD VESLIDNSGY DVCWIRDGEW
1160 1170 1180 1190 1200
LKYTVTVQQS RTYGAAFRVA SPQAGGQVEL KVDGTSEVTV NVPNTGSFDI
1210 1220 1230
YQSIGTQVPL TAGQHTITLA FHGSRMNVDY VDFV
Length:1,234
Mass (Da):130,888
Last modified:March 3, 2009 - v1
Checksum:iF46B787384C7444A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001338 Genomic DNA Translation: ACL15472.1
RefSeqiWP_012616791.1, NC_011832.1

Genome annotation databases

EnsemblBacteriaiACL15472; ACL15472; Mpal_0078
GeneIDi25394066
KEGGimpl:Mpal_0078

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001338 Genomic DNA Translation: ACL15472.1
RefSeqiWP_012616791.1, NC_011832.1

3D structure databases

ProteinModelPortaliB8GIC1
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi521011.Mpal_0078

Protein family/group databases

CAZyiCBM6 Carbohydrate-Binding Module Family 6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL15472; ACL15472; Mpal_0078
GeneIDi25394066
KEGGimpl:Mpal_0078

Phylogenomic databases

eggNOGiarCOG09007 Archaea
ENOG410Y6YC LUCA
OrthoDBiPOG093Z01GF

Enzyme and pathway databases

BioCyciMPAL521011:G1GUJ-81-MONOMER

Family and domain databases

Gene3Di2.60.120.260, 5 hits
3.40.50.1110, 1 hit
InterProiView protein in InterPro
IPR006584 Cellulose-bd_IV
IPR005084 CMB_fam6
IPR008979 Galactose-bd-like_sf
IPR013830 SGNH_hydro
IPR036514 SGNH_hydro_sf
PfamiView protein in Pfam
PF03422 CBM_6, 5 hits
PF13472 Lipase_GDSL_2, 1 hit
SMARTiView protein in SMART
SM00606 CBD_IV, 5 hits
SUPFAMiSSF49785 SSF49785, 5 hits
PROSITEiView protein in PROSITE
PS51175 CBM6, 5 hits
ProtoNetiSearch...

Entry informationi

Entry nameiB8GIC1_METPE
AccessioniPrimary (citable) accession number: B8GIC1
Entry historyiIntegrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: October 10, 2018
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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