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Protein

50S ribosomal protein L19

Gene

rplS

Organism
Desulfatibacillum alkenivorans (strain AK-01)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciDALK439235:G1GUG-4777-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L19UniRule annotation
Gene namesi
Name:rplSUniRule annotation
Ordered Locus Names:Dalk_4644
OrganismiDesulfatibacillum alkenivorans (strain AK-01)
Taxonomic identifieri439235 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobacteraceaeDesulfatibacillum
Proteomesi
  • UP000000739 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001938211 – 11450S ribosomal protein L19Add BLAST114

Interactioni

Protein-protein interaction databases

STRINGi439235.Dalk_4644

Structurei

3D structure databases

ProteinModelPortaliB8FNP1
SMRiB8FNP1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bL19 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108YY1 Bacteria
COG0335 LUCA
HOGENOMiHOG000016265
KOiK02884
OMAiTITVYYE
OrthoDBiPOG091H02BF

Family and domain databases

Gene3Di2.30.30.790, 1 hit
HAMAPiMF_00402 Ribosomal_L19, 1 hit
InterProiView protein in InterPro
IPR038657 L19_sf
IPR001857 Ribosomal_L19
IPR018257 Ribosomal_L19_CS
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR15680 PTHR15680, 1 hit
PfamiView protein in Pfam
PF01245 Ribosomal_L19, 1 hit
PIRSFiPIRSF002191 Ribosomal_L19, 1 hit
PRINTSiPR00061 RIBOSOMALL19
SUPFAMiSSF50104 SSF50104, 1 hit
TIGRFAMsiTIGR01024 rplS_bact, 1 hit
PROSITEiView protein in PROSITE
PS01015 RIBOSOMAL_L19, 1 hit

Sequencei

Sequence statusi: Complete.

B8FNP1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDVIKQIEQE QMRYDLPQFE AGDTVNVHVR IIEGTKERLQ AFKGVVIAKK
60 70 80 90 100
SGTTNATFTV RKVSYGVGVE RVFHAHSPSI DHIEVVSRGK VRRAKLYYLR
110
KLRGKAARIK EKRF
Length:114
Mass (Da):13,112
Last modified:March 3, 2009 - v1
Checksum:i98B1FA0F94817EEE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001322 Genomic DNA Translation: ACL06322.1
RefSeqiWP_015949361.1, NC_011768.1

Genome annotation databases

EnsemblBacteriaiACL06322; ACL06322; Dalk_4644
KEGGidal:Dalk_4644

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001322 Genomic DNA Translation: ACL06322.1
RefSeqiWP_015949361.1, NC_011768.1

3D structure databases

ProteinModelPortaliB8FNP1
SMRiB8FNP1
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi439235.Dalk_4644

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL06322; ACL06322; Dalk_4644
KEGGidal:Dalk_4644

Phylogenomic databases

eggNOGiENOG4108YY1 Bacteria
COG0335 LUCA
HOGENOMiHOG000016265
KOiK02884
OMAiTITVYYE
OrthoDBiPOG091H02BF

Enzyme and pathway databases

BioCyciDALK439235:G1GUG-4777-MONOMER

Family and domain databases

Gene3Di2.30.30.790, 1 hit
HAMAPiMF_00402 Ribosomal_L19, 1 hit
InterProiView protein in InterPro
IPR038657 L19_sf
IPR001857 Ribosomal_L19
IPR018257 Ribosomal_L19_CS
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR15680 PTHR15680, 1 hit
PfamiView protein in Pfam
PF01245 Ribosomal_L19, 1 hit
PIRSFiPIRSF002191 Ribosomal_L19, 1 hit
PRINTSiPR00061 RIBOSOMALL19
SUPFAMiSSF50104 SSF50104, 1 hit
TIGRFAMsiTIGR01024 rplS_bact, 1 hit
PROSITEiView protein in PROSITE
PS01015 RIBOSOMAL_L19, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRL19_DESAA
AccessioniPrimary (citable) accession number: B8FNP1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: March 3, 2009
Last modified: October 10, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
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