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Protein

Histone H2A

Gene

THAPSDRAFT_33270

Organism
Thalassiosira pseudonana (Marine diatom) (Cyclotella nana)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Histone H2AUniRule annotation
Gene namesi
ORF Names:THAPSDRAFT_33270Imported, THAPSDRAFT_37431Imported
OrganismiThalassiosira pseudonana (Marine diatom) (Cyclotella nana)Imported
Taxonomic identifieri35128 [NCBI]
Taxonomic lineageiEukaryotaStramenopilesBacillariophytaCoscinodiscophyceaeThalassiosirophycidaeThalassiosiralesThalassiosiraceaeThalassiosira
Proteomesi
  • UP000001449 Componentsi: Chromosome 14, Chromosome 3

Subcellular locationi

  • Chromosome SAAS annotation
  • Nucleus UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

Chromosome, Nucleosome coreUniRule annotationSAAS annotation, NucleusUniRule annotationSAAS annotation

Interactioni

Subunit structurei

The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.UniRule annotationSAAS annotation

GO - Molecular functioni

Protein-protein interaction databases

STRINGi35128.Thaps37431

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 88HistoneInterPro annotationAdd BLAST81
Domaini91 – 123Histone_H2A_CInterPro annotationAdd BLAST33

Sequence similaritiesi

Belongs to the histone H2A family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1756 Eukaryota
COG5262 LUCA
HOGENOMiHOG000234652
KOiK11251
OMAiMPNIHQT

Family and domain databases

CDDicd00074 H2A, 1 hit
Gene3Di1.10.20.10, 1 hit
InterProiView protein in InterPro
IPR009072 Histone-fold
IPR002119 Histone_H2A
IPR007125 Histone_H2A/H2B/H3
IPR032454 Histone_H2A_C
IPR032458 Histone_H2A_CS
PfamiView protein in Pfam
PF00125 Histone, 1 hit
PF16211 Histone_H2A_C, 1 hit
PRINTSiPR00620 HISTONEH2A
SMARTiView protein in SMART
SM00414 H2A, 1 hit
SUPFAMiSSF47113 SSF47113, 1 hit
PROSITEiView protein in PROSITE
PS00046 HISTONE_H2A, 1 hit

Sequencei

Sequence statusi: Complete.

B8BX19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGKGKGGRG EKKQTSSSAK AGLQFPVGRI GRYLRQGKYA TRMGAGAPVY
60 70 80 90 100
LAAVLEYLCA EILELAGNAA RDNKKSRIVP RHITLAVKND EELNKLLGGV
110 120
TIAAGGVLPN IHAVLLPKKS SVSK
Length:124
Mass (Da):13,054
Last modified:March 3, 2009 - v1
Checksum:i8B1A8FDC2ABC16E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000649 Genomic DNA Translation: EED89017.1
CM000640 Genomic DNA Translation: EED94129.1
RefSeqiXP_002288693.1, XM_002288657.1
XP_002294008.1, XM_002293972.1

Genome annotation databases

EnsemblProtistsiEED89017; EED89017; THAPSDRAFT_37431
EED94129; EED94129; THAPSDRAFT_33270
GeneIDi7442489
7451595
KEGGitps:THAPSDRAFT_33270
tps:THAPSDRAFT_37431

Similar proteinsi

Entry informationi

Entry nameiB8BX19_THAPS
AccessioniPrimary (citable) accession number: B8BX19
Entry historyiIntegrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: March 28, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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