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Entry version 56 (07 Oct 2020)
Sequence version 1 (03 Mar 2009)
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Protein
Submitted name:

Uncharacterized protein

Gene

OsI_35107

Organism
Oryza sativa subsp. indica (Rice)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processTranscription, Transcription regulationARBA annotation
LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:OsI_35107Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOryza sativa subsp. indica (Rice)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri39946 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000007015 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 11

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusARBA annotation

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PRoteomics IDEntifications database

More...
PRIDEi
B8BJ40

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
B8BJ40

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini334 – 394DDTInterPro annotationAdd BLAST61
Domaini548 – 595PHD-typeInterPro annotationAdd BLAST48

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni16 – 60DisorderedSequence analysisAdd BLAST45
Regioni261 – 310DisorderedSequence analysisAdd BLAST50
Regioni1068 – 1107DisorderedSequence analysisAdd BLAST40
Regioni1476 – 1502DisorderedSequence analysisAdd BLAST27
Regioni1607 – 1626DisorderedSequence analysisAdd BLAST20

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi282 – 309PolarSequence analysisAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationARBA annotation

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_002742_1_0_1

Identification of Orthologs from Complete Genome Data

More...
OMAi
SFRPQAY

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.40.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR018501, DDT_dom
IPR028942, WHIM1_dom
IPR019786, Zinc_finger_PHD-type_CS
IPR011011, Znf_FYVE_PHD
IPR001965, Znf_PHD
IPR019787, Znf_PHD-finger
IPR013083, Znf_RING/FYVE/PHD

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02791, DDT, 1 hit
PF00628, PHD, 1 hit
PF15612, WHIM1, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00571, DDT, 1 hit
SM00249, PHD, 4 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF57903, SSF57903, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50827, DDT, 1 hit
PS01359, ZF_PHD_1, 1 hit
PS50016, ZF_PHD_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B8BJ40-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEEPMEVSDR ILHASPAAAA AAPATADDAR ETEIAGGIAS ASAAVEDPPA
60 70 80 90 100
SVPPASEAAG EGVIAVEHER AAAHPVSETK MDVDEVGTAD AEQAVAPAAG
110 120 130 140 150
EVKAEVNGGS IPDKEQDAAA CTPTQVKTEV YENGVQEQGH TVAAVASEVK
160 170 180 190 200
MEGCEGGVVD QKPTTTPADG CQMKEEGECL VGRYISRSVA GHGRILLGKV
210 220 230 240 250
ASYDGSTGIY SVVFEDGQGE DLELAQLQSQ LVGEENGAFG MKVSCRKRKL
260 270 280 290 300
DLLVSSGGAT EVKGPPITRQ RVNESEVSTR PDESQESGSG SDASEDVESS
310 320 330 340 350
SNSSNCTKEL PVEHYPPVQV LELPPSSGDI AVPEEAISYL FSVYNFLRSF
360 370 380 390 400
SVQLFLSPFG LDDFVSSVNC TTQNTLLDAV HVSLLRALRR HLETKSSEGL
410 420 430 440 450
KLASNCLKYL DWTLLDSLTW PAFLLEYLYV MGIIKDLGGR RFGRSVLAIE
460 470 480 490 500
YYKLPVTLKL RILQLLCDHV IDSEELKTEL EEREGYSEEM EYEMDSSTFA
510 520 530 540 550
EVGSRSVLTR GSKASACKKL DALQNLETAQ NGNNPESAST HASQDGNSDD
560 570 580 590 600
CRICGMDGTL VCCDGCPWAY HSRCIGQNKA FLPQGDWFCP ECVVNKLGPT
610 620 630 640 650
SSRIERGARG AQLFGIDMCG RSFLGCCNYL LVIGTSSDVE FCARYYNHCD
660 670 680 690 700
VVKVVQILAS SDAYTDICRR MTEYWSHLLD IFQNERSKIS KEVGRSLMSQ
710 720 730 740 750
SNILSTATPV KANNGSVQAT LKDGQDSKMA VLSQTNAHQV MDNQFTLCSA
760 770 780 790 800
NNNEAFRQTP LAKTYVDNAY RNGAFGPSGT SSISHQSMSM VTVMPNRTQA
810 820 830 840 850
QPAHGLIRPD LSCGSVIGNG MSRENIRSSI SARADLISPP YKSKPPVQLI
860 870 880 890 900
TENMSGGKPA KFSSFRPQAY MNLYNHGNVA ASAAANLAVL KSDEGKAPTS
910 920 930 940 950
HLTTNQRKKL AADCALQVKA FSSAALQFVW PSTEKKVMEV PRDRCGWCLA
960 970 980 990 1000
CQSSAGGTKK ACFLNMATAN ASKGSARILS GMRLIKNSDS HFPSIVTYLS
1010 1020 1030 1040 1050
HMEESLRGLL VGSLQDVQRR QQWYNQLKDA SNCGNIIPLL LELESNIRGV
1060 1070 1080 1090 1100
AFSTSWLKLI DDWPVESPSA SAGASRPAAY QKRGTGGRRG RKRSMASESA
1110 1120 1130 1140 1150
PVTDDDNSWK EVNWWSGGNV SKRILQRGAL PILTIRKAAR QGGKKRMFSV
1160 1170 1180 1190 1200
SYHEGSNFPR RTRQLAWRAC VGLSQSSSQL ALQVRYLDAH IRWKEFIPPD
1210 1220 1230 1240 1250
QIPSEGKSVD SDYSVLRNAV VCDKKIVDNK IRYALKFPNQ KHLPVRVTKN
1260 1270 1280 1290 1300
ILEAEDNQDG DGKFWFSENH IPLYLLREFE QKAGVSSLPT PGMLDSNCFA
1310 1320 1330 1340 1350
NFYQRRVKSS IGDVFFYLLH KGDVYPCTSC KKDVSFRDII KCSSCQGNCH
1360 1370 1380 1390 1400
KECTLRSVGS KEGNAASSLT CKLCLQKRSL MLTNYNTNAS FILPQQKSNV
1410 1420 1430 1440 1450
HHAVAAPKII FKVGSSHSAE PATKVEAPPI VKVEAQPVVK KETWPVVKME
1460 1470 1480 1490 1500
TQPTANVEAQ PTAKVEAFPI SNLATQNNAG AQVQPKTKSK KPKPEKPRKS
1510 1520 1530 1540 1550
KKTEEIKYFG LVWKKSTNDK NNNENSGEVF RANDVILKGK DGVGSSIKPT
1560 1570 1580 1590 1600
CCLCNKPYCP DFLYVRCERC KKWFHGDALQ LEEEKIFELV SYRCCRCRRR
1610 1620 1630 1640 1650
AIPKCPHSDD YKKPEPEYSE QTVATSSQST MLSSEENFAV ADQDPLLASY
1660 1670 1680 1690 1700
GRVEPFGAQT MDADLSMNMM SFNPGNQKLS VRRGQNKNCE YVDQSSIHVD
1710 1720 1730 1740 1750
DYYIQNQPQG NANINFSHSN EFSLSEADGV DASELLGWDF SQGNTSAAPS
1760 1770 1780 1790 1800
DFAANCPWND ISCGSVAGDE YEPQTYFSFT ELLEADDTQF DNTFGMSSSV
1810 1820 1830 1840 1850
QDDGDQQGIG FDEMAFMMED GASNMPFPAI DSASDEVACD RCKNPQPPPD
1860 1870 1880
LKCVVCGLQM HRHCSPWEDG EQPSDSADWS CGACREWR
Length:1,888
Mass (Da):206,711
Last modified:March 3, 2009 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i165357FB7DC1FAEA
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CM000136 Genomic DNA Translation: EEC67676.1

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
BGIOSGA034498-TA; BGIOSGA034498-PA; BGIOSGA034498

Gramene; a comparative resource for plants

More...
Gramenei
BGIOSGA034498-TA; BGIOSGA034498-PA; BGIOSGA034498

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000136 Genomic DNA Translation: EEC67676.1

3D structure databases

SMRiB8BJ40
ModBaseiSearch...

Proteomic databases

PRIDEiB8BJ40

Genome annotation databases

EnsemblPlantsiBGIOSGA034498-TA; BGIOSGA034498-PA; BGIOSGA034498
GrameneiBGIOSGA034498-TA; BGIOSGA034498-PA; BGIOSGA034498

Phylogenomic databases

HOGENOMiCLU_002742_1_0_1
OMAiSFRPQAY

Family and domain databases

Gene3Di3.30.40.10, 2 hits
InterProiView protein in InterPro
IPR018501, DDT_dom
IPR028942, WHIM1_dom
IPR019786, Zinc_finger_PHD-type_CS
IPR011011, Znf_FYVE_PHD
IPR001965, Znf_PHD
IPR019787, Znf_PHD-finger
IPR013083, Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF02791, DDT, 1 hit
PF00628, PHD, 1 hit
PF15612, WHIM1, 1 hit
SMARTiView protein in SMART
SM00571, DDT, 1 hit
SM00249, PHD, 4 hits
SUPFAMiSSF57903, SSF57903, 2 hits
PROSITEiView protein in PROSITE
PS50827, DDT, 1 hit
PS01359, ZF_PHD_1, 1 hit
PS50016, ZF_PHD_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiB8BJ40_ORYSI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B8BJ40
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: October 7, 2020
This is version 56 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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