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Protein
Submitted name:

Pre-mRNA-splicing factor 3

Gene

100279564

Organism
Zea mays (Maize)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Pre-mRNA-splicing factor 3Imported
Gene namesi
Name:100279564Imported
ORF Names:ZEAMMB73_Zm00001d053379Imported
OrganismiZea mays (Maize)Imported
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea
Proteomesi
  • UP000007305 Componenti: Chromosome 4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

ExpressionAtlasiB7ZYS2 differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 219PRP3InterPro annotationAdd BLAST213
Domaini245 – 368DUF1115InterPro annotationAdd BLAST124

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili40 – 60Sequence analysisAdd BLAST21
Coiled coili136 – 158Sequence analysisAdd BLAST23

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2769 Eukaryota
ENOG410XQV0 LUCA
HOGENOMiHOG000205412

Family and domain databases

InterProiView protein in InterPro
IPR010541 DUF1115
IPR013881 Pre-mRNA_splic_Prp3
IPR027104 Prp3
PANTHERiPTHR14212 PTHR14212, 1 hit
PfamiView protein in Pfam
PF06544 DUF1115, 1 hit
PF08572 PRP3, 1 hit

Sequencei

Sequence statusi: Complete.

B7ZYS2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGINQKKLLR PKRPGFQFVE EGKLSRQAEL QKIKSQFGEA QAKELKVKQA
60 70 80 90 100
QLAKAKAEVD INPNFIEVAP GVRAPKQKQN EDIPEIEPWD AKILLSATYE
110 120 130 140 150
DISVEEINMD KITIYVEHPE PYDPPAEPAP PPPQPLKLTK KEQKKLRTQR
160 170 180 190 200
RLAKEKDRQE MIRQGLLEPP KPKVKMSNLM KVLGSEAVQD PTRLEMEIRT
210 220 230 240 250
AAAEREQAHV DRNIARKLTP SERREKKERK LFDDPTNTIE TIVCVYKIRD
260 270 280 290 300
LSHPQTRFKV DVNAQENKLT GAVVITDSIS VVVVEGGKKS IKRYNKLMLN
310 320 330 340 350
RIDWPAAVGG DEDTEMEADK PVNSCVLVWQ GSVAKPTFHR FTVHNCRSEA
360 370
AAKKVFVDVS VPHYWDLAVN FSEDSS
Length:376
Mass (Da):42,738
Last modified:March 3, 2009 - v1
Checksum:i50E9550D0613BD68
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT054464 mRNA Translation: ACL53071.1
CM000780 Genomic DNA Translation: AQK59347.1
RefSeqiNP_001146033.1, NM_001152561.1
UniGeneiZm.17878

Genome annotation databases

EnsemblPlantsiZm00001d053379_T004; Zm00001d053379_P004; Zm00001d053379
GeneIDi100279564
GrameneiZm00001d053379_T004; Zm00001d053379_P004; Zm00001d053379

Similar proteinsi

Entry informationi

Entry nameiB7ZYS2_MAIZE
AccessioniPrimary (citable) accession number: B7ZYS2
Entry historyiIntegrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: July 18, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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