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Protein
Submitted name:

Apolipoprotein L 6

Gene

Apol6

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

  • lipid binding Source: GO_Central

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Apolipoprotein L 6Imported
Gene namesi
Name:Apol6Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 15

Organism-specific databases

MGIiMGI:1919189 Apol6

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiB7ZC54

Expressioni

Gene expression databases

BgeeiENSMUSG00000033576 Expressed in 60 organ(s), highest expression level in epididymal fat pad
ExpressionAtlasiB7ZC54 baseline and differential
GenevisibleiB7ZC54 MM

Structurei

3D structure databases

ProteinModelPortaliB7ZC54
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili266 – 286Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IWES Eukaryota
ENOG410Y0AF LUCA
GeneTreeiENSGT00510000046700
HOGENOMiHOG000294132
HOVERGENiHBG106550
OMAiQESTACE
PhylomeDBiB7ZC54

Family and domain databases

InterProiView protein in InterPro
IPR008405 ApoL
PANTHERiPTHR14096 PTHR14096, 1 hit
PfamiView protein in Pfam
PF05461 ApoL, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

B7ZC54-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MALVQTPTPS HQTEEDYEAD AELLRDKDDS PLDVEDDVLF LKQFPSWRKK
60 70 80 90 100
EKKRIRTLYA IADHIDESHQ KATKIKVVTT SASVASGVLS LLGLALATTT
110 120 130 140 150
AGGSLVLTAV GHGLGAVAGV TEIVTNVRKN SRNKRALAQV NSIMPNSDQE
160 170 180 190 200
LEGVKGEKTT FVTAAGDLVY KCGNAWDNIK KHLRALQLTR TQPHVTSAAK
210 220 230 240 250
KLMTAGHVSA RSGRQVQKAF GGTALAMTKN ALRMGRAAAA LSLGQDIYTL
260 270 280 290 300
WEDWKDLKAA NPTELAEELR ARAAERERVL AEHTCRYRKL QRLSKEAARS
310 320
SLKGNKVTQP PSSSTERARL W
Length:321
Mass (Da):35,104
Last modified:March 3, 2009 - v1
Checksum:i6A96EF72F7543CFD
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
B7ZC55B7ZC55_MOUSE
Apolipoprotein L 6
Apol6
329Annotation score:
B7ZC57B7ZC57_MOUSE
Apolipoprotein L 6
Apol6
262Annotation score:
B7ZC56B7ZC56_MOUSE
Apolipoprotein L 6
Apol6
55Annotation score:
D6RFC1D6RFC1_MOUSE
Apolipoprotein L 6
Apol6
59Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL603843 Genomic DNA No translation available.
RefSeqiNP_082286.1, NM_028010.1
XP_006521484.1, XM_006521421.3
UniGeneiMm.34173

Genome annotation databases

EnsembliENSMUST00000149569; ENSMUSP00000120866; ENSMUSG00000033576
GeneIDi71939
UCSCiuc007wna.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL603843 Genomic DNA No translation available.
RefSeqiNP_082286.1, NM_028010.1
XP_006521484.1, XM_006521421.3
UniGeneiMm.34173

3D structure databases

ProteinModelPortaliB7ZC54
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB7ZC54

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000149569; ENSMUSP00000120866; ENSMUSG00000033576
GeneIDi71939
UCSCiuc007wna.2 mouse

Organism-specific databases

CTDi80830
MGIiMGI:1919189 Apol6

Phylogenomic databases

eggNOGiENOG410IWES Eukaryota
ENOG410Y0AF LUCA
GeneTreeiENSGT00510000046700
HOGENOMiHOG000294132
HOVERGENiHBG106550
OMAiQESTACE
PhylomeDBiB7ZC54

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000033576 Expressed in 60 organ(s), highest expression level in epididymal fat pad
ExpressionAtlasiB7ZC54 baseline and differential
GenevisibleiB7ZC54 MM

Family and domain databases

InterProiView protein in InterPro
IPR008405 ApoL
PANTHERiPTHR14096 PTHR14096, 1 hit
PfamiView protein in Pfam
PF05461 ApoL, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB7ZC54_MOUSE
AccessioniPrimary (citable) accession number: B7ZC54
Entry historyiIntegrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: November 7, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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