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UniProtKB - B7XEJ1 (B7XEJ1_CUTAC)

Entry version 41 (07 Oct 2020)
Sequence version 1 (03 Mar 2009)
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Protein
Submitted name:

1,3-beta-galactosyl-N-acetylhexosamine phosphorylase

Gene

gnpA

Organism
Cutibacterium acnes (Propionibacterium acnes)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionGlycosyltransferaseImported, Transferase

Enzyme and pathway databases

BRENDA Comprehensive Enzyme Information System

More...BRENDAi		2.4.1.211, 5029

Protein family/group databases

Carbohydrate-Active enZymes

More...CAZyi		GH112, Glycoside Hydrolase Family 112

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
1,3-beta-galactosyl-N-acetylhexosamine phosphorylaseImported (EC:2.4.1.211Imported)
Submitted name:
Galacto-N-biose phosphorylaseImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:gnpAImported
ORF Names:FD518_06495Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCutibacterium acnes (Propionibacterium acnes)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri1747 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Actinobacteria › Propionibacteriales › Propionibacteriaceae › Cutibacterium
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000308048 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini13 – 449Lact_bio_phlaseInterPro annotationAdd BLAST437
Domaini453 – 670LBP_MInterPro annotationAdd BLAST218
Domaini676 – 727LBP_CInterPro annotationAdd BLAST52

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		2.60.40.10, 1 hit
3.40.50.880, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR029062, Class_I_gatase-like
IPR013783, Ig-like_fold
IPR035080, Lact_bio_phlase-like_N
IPR012711, Lacto-N-biose_phosphorylase
IPR035356, LBP_C
IPR035363, LBP_M

Pfam protein domain database

More...Pfami		View protein in Pfam
PF09508, Lact_bio_phlase, 1 hit
PF17386, LBP_C, 1 hit
PF17385, LBP_M, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF52317, SSF52317, 1 hit

TIGRFAMs; a protein family database

More...TIGRFAMsi		TIGR02336, TIGR02336, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B7XEJ1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSSTSQTTS RAGRLTLPVE KGMDAQVAEL LERLQADAVR NSDGTELPEI 
        60         70         80         90        100
VNKLATKIYQ TYFVGRGDQD WAQTHPRELT RIYLMSERTP ALADGELSID 
       110        120        130        140        150
LMTNWFVDQV YPDTDCDVER WWQVIDRTTG DVIAPGAWHV DPADLSVTMD 
       160        170        180        190        200
QAQAGHVYTV GFLAVQRWDP TQMYNYLTNG WADDPQRIKE SPYDIRYPQT 
       210        220        230        240        250
WQHVRHALDQ WLADNPQVDV VRFTTFFYHF TLVYGSDGTE RFVDWFGYSA 
       260        270        280        290        300
SVSVPAMEAF EKRFGYPLQA EDFIDEGWYN SPFRVPRKSF RDWVSFQHEF 
       310        320        330        340        350
VTSRMAELVE QVHAAGREAM MFLGDNWIGT EPYGPHFAHT GIDAVVGSVG 
       360        370        380        390        400
SGATCRMISD IPGVRYTEGR LLPYFFPHVF YPGGDPVTEA NASWLAARRA 
       410        420        430        440        450
IVRSPLDRIG YGGYLSLAVQ HPEFVDRMEE IVNEFRAIHA AAAGQRPIAT 
       460        470        480        490        500
GPRVAIVNCW GALRSWQTHM VAHALHYRQA YSYLGVLESL SGLPLQVDFL 
       510        520        530        540        550
SFDDIRNGVP EGVEVLINVG AAGTAFSGGS EWADERVTSA VRRFVAAGGG 
       560        570        580        590        600
LVGVGDPTAH PARGAVYQLS DVLGVDRELG WGLSTHRPMH TSDHHFVTLD 
       610        620        630        640        650
LSSRLDVGEG TPDVFCASAT TTVLAAHHEQ VDLAVNQFGC GRAVYLAGLP 
       660        670        680        690        700
YSSQNARLLH RALAWAGHRE DAFTTWTSSD VRAEVAVYPH SDRLLVINNS 
       710        720        730 
LDQVTTTVST PTTVREVHME AAGHLWFDLE LHPLDIPG
Length:738
Mass (Da):82,140
Last modified:March 3, 2009 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i6956F063E8597568
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AB468066 Genomic DNA Translation: BAH10636.1
VBYF01000002 Genomic DNA Translation: TLG22067.1

NCBI Reference Sequences

More...RefSeqi		WP_002515765.1, NZ_WBMI01000002.1

Genome annotation databases

Pathosystems Resource Integration Center (PATRIC)

More...PATRICi		fig|1747.45.peg.744

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB468066 Genomic DNA Translation: BAH10636.1
VBYF01000002 Genomic DNA Translation: TLG22067.1
RefSeqiWP_002515765.1, NZ_WBMI01000002.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein family/group databases

CAZyiGH112, Glycoside Hydrolase Family 112

Genome annotation databases

PATRICifig|1747.45.peg.744

Enzyme and pathway databases

BRENDAi2.4.1.211, 5029

Family and domain databases

Gene3Di2.60.40.10, 1 hit
3.40.50.880, 1 hit
InterProiView protein in InterPro
IPR029062, Class_I_gatase-like
IPR013783, Ig-like_fold
IPR035080, Lact_bio_phlase-like_N
IPR012711, Lacto-N-biose_phosphorylase
IPR035356, LBP_C
IPR035363, LBP_M
PfamiView protein in Pfam
PF09508, Lact_bio_phlase, 1 hit
PF17386, LBP_C, 1 hit
PF17385, LBP_M, 1 hit
SUPFAMiSSF52317, SSF52317, 1 hit
TIGRFAMsiTIGR02336, TIGR02336, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiB7XEJ1_CUTAC
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B7XEJ1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: October 7, 2020
This is version 41 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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