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Protein

Fumarate reductase subunit D

Gene

frdD

Organism
Escherichia coli O45:K1 (strain S88 / ExPEC)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.UniRule annotation

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Fumarate reductase subunit DUniRule annotation
Alternative name(s):
Fumarate reductase 13 kDa hydrophobic proteinUniRule annotation
Gene namesi
Name:frdDUniRule annotation
Ordered Locus Names:ECS88_4739
OrganismiEscherichia coli O45:K1 (strain S88 / ExPEC)
Taxonomic identifieri585035 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000747 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei26 – 46HelicalUniRule annotationAdd BLAST21
Transmembranei55 – 75HelicalUniRule annotationAdd BLAST21
Transmembranei99 – 119HelicalUniRule annotationAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001323961 – 119Fumarate reductase subunit DAdd BLAST119

Interactioni

Subunit structurei

Part of an enzyme complex containing four subunits: a flavoprotein (FrdA), an iron-sulfur protein (FrdB), and two hydrophobic anchor proteins (FrdC and FrdD).UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliB7MKV8
SMRiB7MKV8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FrdD family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000281495
KOiK00247
OMAiGMWSAIV

Family and domain databases

CDDicd00547 QFR_TypeD_subunitD, 1 hit
Gene3Di1.20.1300.10, 1 hit
HAMAPiMF_00709 Fumarate_red_D, 1 hit
InterProiView protein in InterPro
IPR003418 Fumarate_red_D
IPR034804 SQR/QFR_C/D
PfamiView protein in Pfam
PF02313 Fumarate_red_D, 1 hit
PIRSFiPIRSF000179 FrdD, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD015693 Fumarate_red_D, 1 hit
SUPFAMiSSF81343 SSF81343, 1 hit

Sequencei

Sequence statusi: Complete.

B7MKV8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MINPNPKRSD EPVFWGLFGA GGMWSAIIAP VMILLVGILL PLGLFPGDAL
60 70 80 90 100
SYERVLAFAQ SFIGRVFLFL MIVLPLWCGL HRMHHAMHDL KIHVPAGKWV
110
FYGLAAILTV VTLIGVVTI
Length:119
Mass (Da):13,107
Last modified:February 10, 2009 - v1
Checksum:iE9D119342B1D5357
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU928161 Genomic DNA Translation: CAR05889.1
RefSeqiWP_000609663.1, NC_011742.1

Genome annotation databases

EnsemblBacteriaiCAR05889; CAR05889; ECS88_4739
KEGGiecz:ECS88_4739

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU928161 Genomic DNA Translation: CAR05889.1
RefSeqiWP_000609663.1, NC_011742.1

3D structure databases

ProteinModelPortaliB7MKV8
SMRiB7MKV8
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAR05889; CAR05889; ECS88_4739
KEGGiecz:ECS88_4739

Phylogenomic databases

HOGENOMiHOG000281495
KOiK00247
OMAiGMWSAIV

Family and domain databases

CDDicd00547 QFR_TypeD_subunitD, 1 hit
Gene3Di1.20.1300.10, 1 hit
HAMAPiMF_00709 Fumarate_red_D, 1 hit
InterProiView protein in InterPro
IPR003418 Fumarate_red_D
IPR034804 SQR/QFR_C/D
PfamiView protein in Pfam
PF02313 Fumarate_red_D, 1 hit
PIRSFiPIRSF000179 FrdD, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD015693 Fumarate_red_D, 1 hit
SUPFAMiSSF81343 SSF81343, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiFRDD_ECO45
AccessioniPrimary (citable) accession number: B7MKV8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: February 10, 2009
Last modified: November 22, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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