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Protein
Submitted name:

Ubiquitin fusion protein

Gene

103647262

Organism
Zea mays (Maize)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ubiquitin fusion proteinImported
Submitted name:
Ubiquitin-60S ribosomal protein L40-1Imported
Gene namesi
Name:103647262Imported
ORF Names:ZEAMMB73_Zm00001d005334Imported
OrganismiZea mays (Maize)Imported
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea
Proteomesi
  • UP000007305 Componenti: Chromosome 2

Subcellular locationi

PTM / Processingi

Proteomic databases

PRIDEiB6SHW9

Expressioni

Gene expression databases

ExpressionAtlasiB6SHW9 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi4577.GRMZM2G047727_P01

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 76Ubiquitin-likeInterPro annotationAdd BLAST76

Phylogenomic databases

eggNOGiENOG410IUNU Eukaryota
COG1552 LUCA
HOGENOMiHOG000233942
KOiK02927
OrthoDBiEOG09360PUP

Family and domain databases

Gene3Di2.20.28.70, 1 hit
InterProiView protein in InterPro
IPR038587 L40e_sf
IPR001975 Ribosomal_L40e
IPR019956 Ubiquitin
IPR029071 Ubiquitin-like_domsf
IPR019954 Ubiquitin_CS
IPR000626 Ubiquitin_dom
PfamiView protein in Pfam
PF01020 Ribosomal_L40e, 1 hit
PF00240 ubiquitin, 1 hit
PRINTSiPR00348 UBIQUITIN
SMARTiView protein in SMART
SM01377 Ribosomal_L40e, 1 hit
SM00213 UBQ, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit
PROSITEiView protein in PROSITE
PS00299 UBIQUITIN_1, 1 hit
PS50053 UBIQUITIN_2, 1 hit

Sequencei

Sequence statusi: Complete.

B6SHW9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL
60 70 80 90 100
EDGRTLADYN IQKESTLHLV LRLRGGIIEP SLQALARKYN QDKMICRKCY
110 120
ARLHPRAVNC RKKKCGHSNQ LRAKKKIKN
Length:129
Mass (Da):14,758
Last modified:December 16, 2008 - v1
Checksum:i710B0EB17A2F6985
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU952334 mRNA Translation: ACG24452.1
EU952501 mRNA Translation: ACG24619.1
EU953098 mRNA Translation: ACG25216.1
EU955270 mRNA Translation: ACG27388.1
EU958499 mRNA Translation: ACG30617.1
EU966735 mRNA Translation: ACG38853.1
EU967205 mRNA Translation: ACG39323.1
BT061197 mRNA Translation: ACN25894.1
CM007648 Genomic DNA Translation: ONM20857.1
RefSeqiXP_008653176.1, XM_008654954.1
XP_008653188.1, XM_008654966.1
XP_008670036.1, XM_008671814.1
UniGeneiZm.138222
Zm.158257
Zm.16530
Zm.19937

Genome annotation databases

EnsemblPlantsiZm00001d005334_T001; Zm00001d005334_P001; Zm00001d005334
GeneIDi103633247
103633261
103647262
GrameneiZm00001d005334_T001; Zm00001d005334_P001; Zm00001d005334
KEGGizma:103633261
zma:103647262

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU952334 mRNA Translation: ACG24452.1
EU952501 mRNA Translation: ACG24619.1
EU953098 mRNA Translation: ACG25216.1
EU955270 mRNA Translation: ACG27388.1
EU958499 mRNA Translation: ACG30617.1
EU966735 mRNA Translation: ACG38853.1
EU967205 mRNA Translation: ACG39323.1
BT061197 mRNA Translation: ACN25894.1
CM007648 Genomic DNA Translation: ONM20857.1
RefSeqiXP_008653176.1, XM_008654954.1
XP_008653188.1, XM_008654966.1
XP_008670036.1, XM_008671814.1
UniGeneiZm.138222
Zm.158257
Zm.16530
Zm.19937

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4577.GRMZM2G047727_P01

Proteomic databases

PRIDEiB6SHW9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiZm00001d005334_T001; Zm00001d005334_P001; Zm00001d005334
GeneIDi103633247
103633261
103647262
GrameneiZm00001d005334_T001; Zm00001d005334_P001; Zm00001d005334
KEGGizma:103633261
zma:103647262

Phylogenomic databases

eggNOGiENOG410IUNU Eukaryota
COG1552 LUCA
HOGENOMiHOG000233942
KOiK02927
OrthoDBiEOG09360PUP

Gene expression databases

ExpressionAtlasiB6SHW9 baseline and differential

Family and domain databases

Gene3Di2.20.28.70, 1 hit
InterProiView protein in InterPro
IPR038587 L40e_sf
IPR001975 Ribosomal_L40e
IPR019956 Ubiquitin
IPR029071 Ubiquitin-like_domsf
IPR019954 Ubiquitin_CS
IPR000626 Ubiquitin_dom
PfamiView protein in Pfam
PF01020 Ribosomal_L40e, 1 hit
PF00240 ubiquitin, 1 hit
PRINTSiPR00348 UBIQUITIN
SMARTiView protein in SMART
SM01377 Ribosomal_L40e, 1 hit
SM00213 UBQ, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit
PROSITEiView protein in PROSITE
PS00299 UBIQUITIN_1, 1 hit
PS50053 UBIQUITIN_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB6SHW9_MAIZE
AccessioniPrimary (citable) accession number: B6SHW9
Entry historyiIntegrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: October 10, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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