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Entry version 69 (26 Feb 2020)
Sequence version 1 (16 Dec 2008)
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Protein
Submitted name:

Conjugal transfer protein

Gene

traC

Organism
Klebsiella pneumoniae
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Conjugal transfer proteinImported
Submitted name:
P-type DNA transfer protein VirB5Imported
Submitted name:
TraCImported
Submitted name:
TraC conjugal transfer proteinImported
Submitted name:
TraC, conjugal transfer proteinImported
Submitted name:
Type IV secretion system proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:traCImported
ORF Names:BVX91_28850Imported, C1459_07025Imported, pkp469IL_0140Imported, pkp53il_00145Imported, SAMEA2053876_05080Imported, SAMEA3538476_04919Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates if the gene coding for the protein originates from the hydrogenosome, the mitochondrion, the nucleomorph, different plastids or a plasmid. The absence of this section means that the gene is located in one of the main chromosomal element(s).<p><a href='/help/encoded_on' target='_top'>More...</a></p>Encoded oniPlasmid 12Imported
Plasmid 9Imported
Plasmid pIMP-1495Imported
Plasmid pKP1433Imported
Plasmid pKP53ILImported
Plasmid pKP96Imported
Plasmid pKPI-6Imported
Plasmid pLK78Imported
Plasmid pMTY14343_IncNImported
Plasmid pkp469ILImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiKlebsiella pneumoniaeImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri573 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeKlebsiella
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000326321 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000289874 Componenti: Chromosome
  • UP000292131 Componenti: Unassembled WGS sequence
  • UP000259433 Componenti: Unassembled WGS sequence
  • UP000218240 Componenti: Unassembled WGS sequence

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 24Sequence analysisAdd BLAST24
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_501508737525 – 237Sequence analysisAdd BLAST213

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili34 – 68Sequence analysisAdd BLAST35
Coiled coili196 – 216Sequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.20.58.430, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR014158 T4SS_VirB5
IPR023220 T4SS_VirB5-domain

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF07996 T4SS, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B6RFP3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKKTLTAVLL TTGLILGGAQ SASAGIIVTN PTELAKQVEQ LQQMAQQLEQ
60 70 80 90 100
LKSQLQTQKN MYESMAKTTN LGDLLGTSTS TLANNLPDNW KEIYSDAMNS
110 120 130 140 150
SSSVTPSVNS MMGQFNAEVD DMTPSEAITY MNKKLAEKGA YDRVMAEKAY
160 170 180 190 200
NNQMQELTDM QELTEQIKTT PDLKSIADLQ ARIQTSQGAI QGEQAKLNLM
210 220 230
NMLQQSQDKL LRAQKERATH NFVFGTGGDV TASPSIN
Length:237
Mass (Da):25,934
Last modified:December 16, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC4DFD7B4E3EAD821
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
EU195449 Genomic DNA Translation: ABY74358.1
FJ223605 Genomic DNA Translation: ACI63053.1
FJ223607 Genomic DNA Translation: ACI63170.1
JX397875 Genomic DNA Translation: AGC23399.1
KF017315 Genomic DNA Translation: AGN11798.1
KF181259 Genomic DNA Translation: AGP03294.1
KJ440075 Genomic DNA Translation: AIU96892.1
KM977631 Genomic DNA Translation: AIW55686.1
AB616660 Genomic DNA Translation: BAM29012.1
AP018557 Genomic DNA Translation: BBD75810.1
NSMB01000098 Genomic DNA Translation: PAX09950.1
POWO01000289 Genomic DNA Translation: TAI78588.1
UOCE01000020 Genomic DNA Translation: VAS32893.1
UKJU02000033 Genomic DNA Translation: VVL15042.1

NCBI Reference Sequences

More...
RefSeqi
WP_001749960.1, NZ_WEKU01000042.1
YP_002286909.1, NC_011383.1
YP_002286995.1, NC_011385.1
YP_002332881.1, NC_011617.1
YP_008003436.1, NC_021238.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
SAV08738; SAV08738; SAMEA2273624_05630

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
15564395
39674175
6993929
6994016
7065616

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|573.1511.peg.5372

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU195449 Genomic DNA Translation: ABY74358.1
FJ223605 Genomic DNA Translation: ACI63053.1
FJ223607 Genomic DNA Translation: ACI63170.1
JX397875 Genomic DNA Translation: AGC23399.1
KF017315 Genomic DNA Translation: AGN11798.1
KF181259 Genomic DNA Translation: AGP03294.1
KJ440075 Genomic DNA Translation: AIU96892.1
KM977631 Genomic DNA Translation: AIW55686.1
AB616660 Genomic DNA Translation: BAM29012.1
AP018557 Genomic DNA Translation: BBD75810.1
NSMB01000098 Genomic DNA Translation: PAX09950.1
POWO01000289 Genomic DNA Translation: TAI78588.1
UOCE01000020 Genomic DNA Translation: VAS32893.1
UKJU02000033 Genomic DNA Translation: VVL15042.1
RefSeqiWP_001749960.1, NZ_WEKU01000042.1
YP_002286909.1, NC_011383.1
YP_002286995.1, NC_011385.1
YP_002332881.1, NC_011617.1
YP_008003436.1, NC_021238.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiSAV08738; SAV08738; SAMEA2273624_05630
GeneIDi15564395
39674175
6993929
6994016
7065616
PATRICifig|573.1511.peg.5372

Family and domain databases

Gene3Di1.20.58.430, 1 hit
InterProiView protein in InterPro
IPR014158 T4SS_VirB5
IPR023220 T4SS_VirB5-domain
PfamiView protein in Pfam
PF07996 T4SS, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiB6RFP3_KLEPN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B6RFP3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: February 26, 2020
This is version 69 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

PlasmidImported
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