UniProtKB - B6HGJ5 (B6HGJ5_PENRW)
Protein
Submitted name:
Pc20g12340 protein
Gene
Pc20g12340
Organism
Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255) (Penicillium chrysogenum)
Status
Functioni
RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit.ARBA annotation
GO - Molecular functioni
- RNA binding Source: InterPro
Keywordsi
Biological process | Ribosome biogenesisARBA annotation, rRNA processingARBA annotation |
Enzyme and pathway databases
BioCyci | PCHR:PC20G12340-MONOMER |
Names & Taxonomyi
Protein namesi | Submitted name: Pc20g12340 proteinImported |
Gene namesi | ORF Names:Pc20g12340Imported, PCH_Pc20g12340Imported |
Organismi | Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255) (Penicillium chrysogenum)Imported |
Taxonomic identifieri | 500485 [NCBI] |
Taxonomic lineagei | Eukaryota › Fungi › Dikarya › Ascomycota › Pezizomycotina › Eurotiomycetes › Eurotiomycetidae › Eurotiales › Aspergillaceae › Penicillium › Penicillium chrysogenum species complex › |
Proteomesi |
|
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 468 – 810 | PUM-HDInterPro annotationAdd BLAST | 343 | |
Repeati | 490 – 525 | PumilioPROSITE-ProRule annotationAdd BLAST | 36 | |
Repeati | 526 – 561 | PumilioPROSITE-ProRule annotationAdd BLAST | 36 | |
Repeati | 562 – 597 | PumilioPROSITE-ProRule annotationAdd BLAST | 36 | |
Repeati | 598 – 633 | PumilioPROSITE-ProRule annotationAdd BLAST | 36 | |
Repeati | 634 – 669 | PumilioPROSITE-ProRule annotationAdd BLAST | 36 | |
Repeati | 670 – 705 | PumilioPROSITE-ProRule annotationAdd BLAST | 36 | |
Repeati | 706 – 741 | PumilioPROSITE-ProRule annotationAdd BLAST | 36 | |
Repeati | 749 – 784 | PumilioPROSITE-ProRule annotationAdd BLAST | 36 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 39 | DisorderedSequence analysisAdd BLAST | 39 | |
Regioni | 105 – 142 | DisorderedSequence analysisAdd BLAST | 38 | |
Regioni | 211 – 271 | DisorderedSequence analysisAdd BLAST | 61 | |
Regioni | 819 – 906 | DisorderedSequence analysisAdd BLAST | 88 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 1 – 38 | PolarSequence analysisAdd BLAST | 38 | |
Compositional biasi | 244 – 271 | PolarSequence analysisAdd BLAST | 28 | |
Compositional biasi | 819 – 842 | PolarSequence analysisAdd BLAST | 24 | |
Compositional biasi | 865 – 898 | PolarSequence analysisAdd BLAST | 34 |
Keywords - Domaini
RepeatARBA annotationPhylogenomic databases
eggNOGi | KOG1488, Eukaryota |
HOGENOMi | CLU_004017_4_2_1 |
OMAi | SYGKQIV |
OrthoDBi | 1364009at2759 |
Family and domain databases
CDDi | cd07920, Pumilio, 1 hit |
Gene3Di | 1.25.10.10, 1 hit |
InterProi | View protein in InterPro IPR011989, ARM-like IPR016024, ARM-type_fold IPR033133, PUM-HD IPR033712, Pumilio_RNA-bd IPR001313, Pumilio_RNA-bd_rpt |
Pfami | View protein in Pfam PF00806, PUF, 8 hits |
SMARTi | View protein in SMART SM00025, Pumilio, 8 hits |
SUPFAMi | SSF48371, SSF48371, 1 hit |
PROSITEi | View protein in PROSITE PS50302, PUM, 8 hits PS50303, PUM_HD, 1 hit |
i Sequence
Sequence statusi: Complete.
B6HGJ5-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAANATSVHN ARSNRSNMSS SGMNDRNRGS QGNSVGKGFG ASKASWKNNI
60 70 80 90 100
WGDSNLGGFG DAMLTQLVEQ HLSETAFEGK SGSGSLLSTS ESDGWSGRAN
110 120 130 140 150
LPWSTVNTNP SFQNRGLATS PTQTRANDRS APAINETGDS SYFALPRTTG
160 170 180 190 200
IGANTGAASH RPYLNAGSEG VSPSGDGISF GGFAGRRQMN ATGLGGSPVG
210 220 230 240 250
TTFPVKPGFA NPLDGASGDG MGASMGMGSL GSGIGEHVSP PQGRSALSHA
260 270 280 290 300
SHNSASYTTQ RPAHSAHPSF YSDTHSIDGR YSSGSMDLTA GFNKLQLNDA
310 320 330 340 350
NYASQAAQRP SFVPHASFDG TFQRGKYQNN EDSYQALGYT AEAAQEMQIA
360 370 380 390 400
YAARSRAANT GSISPSDYAR IDSPIYTGVD GAAAQYRNAG ANESQVAAFE
410 420 430 440 450
RRLRNFQEQE LAQNASRMQY PPSYDFQAYQ ASRLNAMSGF YPVGHLSGLG
460 470 480 490 500
AAALVSRTQR EHDPTQVVRS PLLEEFRANS KGNKRYELKD IYNHVVEFSG
510 520 530 540 550
DQHGSRFIQQ KLETANSDEK EQVFREIQPN CLQLMTDVFG NYVVQKLFEH
560 570 580 590 600
GNQTQKKILA NQMRGHVLAL STQMYGCRVV QKALEHILTD QQAAMVKELE
610 620 630 640 650
NHVLKCVRDQ NGNHVIQKAI ERVPSQYVQF IINAFRGQVN RLAAHPYGCR
660 670 680 690 700
VIQRMLEHCE EVDRQSILAE LHACTSNLIP DQFGNYVIQH VIENGDEKDR
710 720 730 740 750
TRMIDIVMGQ LLAYSKHKFA SNVVEKSIEF GAEHERNHII STLTSTNDRG
760 770 780 790 800
ESPLLGLMRD QYGNYVIQKV LGQLKDAERE ALIEQIKPLL SQLKKFSYGK
810 820 830 840 850
QIVAIEKLIF DPNSPATVPL SHTTSTTPPH SHKSSPQPVK RSIPTEQPRA
860 870 880 890 900
PFVGNAPPTP PPTDAQTTVD TTLESKGLAK STVTSVSSPE TGNTGVTVPV
DVASAH
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AM920435 Genomic DNA Translation: CAP86563.1 |
RefSeqi | XP_002563719.1, XM_002563673.1 |
Genome annotation databases
EnsemblFungii | CAP86563; CAP86563; PCH_Pc20g12340 |
GeneIDi | 8307283 |
KEGGi | pcs:Pc20g12340 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AM920435 Genomic DNA Translation: CAP86563.1 |
RefSeqi | XP_002563719.1, XM_002563673.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 1108849.XP_002563719.1 |
Genome annotation databases
EnsemblFungii | CAP86563; CAP86563; PCH_Pc20g12340 |
GeneIDi | 8307283 |
KEGGi | pcs:Pc20g12340 |
Phylogenomic databases
eggNOGi | KOG1488, Eukaryota |
HOGENOMi | CLU_004017_4_2_1 |
OMAi | SYGKQIV |
OrthoDBi | 1364009at2759 |
Enzyme and pathway databases
BioCyci | PCHR:PC20G12340-MONOMER |
Family and domain databases
CDDi | cd07920, Pumilio, 1 hit |
Gene3Di | 1.25.10.10, 1 hit |
InterProi | View protein in InterPro IPR011989, ARM-like IPR016024, ARM-type_fold IPR033133, PUM-HD IPR033712, Pumilio_RNA-bd IPR001313, Pumilio_RNA-bd_rpt |
Pfami | View protein in Pfam PF00806, PUF, 8 hits |
SMARTi | View protein in SMART SM00025, Pumilio, 8 hits |
SUPFAMi | SSF48371, SSF48371, 1 hit |
PROSITEi | View protein in PROSITE PS50302, PUM, 8 hits PS50303, PUM_HD, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | B6HGJ5_PENRW | |
Accessioni | B6HGJ5Primary (citable) accession number: B6HGJ5 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | December 16, 2008 |
Last sequence update: | December 16, 2008 | |
Last modified: | December 2, 2020 | |
This is version 62 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |