Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 58 (26 Feb 2020)
Sequence version 1 (16 Dec 2008)
Previous versions | rss
Help videoAdd a publicationFeedback
Protein
Submitted name:

Pc13g08410 protein

Gene

Pc13g08410

Organism
Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255) (Penicillium chrysogenum)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
PCHR:PC13G08410-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Pc13g08410 proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:Pc13g08410Imported, PCH_Pc13g08410Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPenicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255) (Penicillium chrysogenum)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri500485 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaePenicilliumPenicillium chrysogenum species complex
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000724 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Contig Pc00c13

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
1108849.XP_002559266.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini560 – 640Shikimate_dh_NInterPro annotationAdd BLAST81
Domaini700 – 747Shikimate_DHInterPro annotationAdd BLAST48
Domaini842 – 872SDH_CInterPro annotationAdd BLAST31

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 68DisorderedSequence analysisAdd BLAST68

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi7 – 21PolyampholyteSequence analysisAdd BLAST15
Compositional biasi43 – 62PolyampholyteSequence analysisAdd BLAST20

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0692 Eukaryota
COG0169 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_008871_0_1_1

Identification of Orthologs from Complete Genome Data

More...
OMAi
MIVSCIP

Database of Orthologous Groups

More...
OrthoDBi
187464at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00502 DHQase_I, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.20.20.70, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR013785 Aldolase_TIM
IPR001381 DHquinase_I
IPR036291 NAD(P)-bd_dom_sf
IPR027417 P-loop_NTPase
IPR041121 SDH_C
IPR031322 Shikimate/glucono_kinase
IPR013708 Shikimate_DH-bd_N
IPR006151 Shikm_DH/Glu-tRNA_Rdtase

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01487 DHquinase_I, 1 hit
PF18317 SDH_C, 1 hit
PF01488 Shikimate_DH, 1 hit
PF08501 Shikimate_dh_N, 1 hit
PF01202 SKI, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF51735 SSF51735, 1 hit
SSF52540 SSF52540, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B6H4C4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSMLVRPPKR KLHEVETIDD GPRKYTSGIA PCPTVHLSSR PPSRQLGEHR
60 70 80 90 100
ETSGDSRPPS LREAHSNRGS PVLFEHGHLQ TPRIFSPDAS IVLIGIRGTG
110 120 130 140 150
KSSLAVILAA TSGRRLIDAD RYFQQSVGCS RAEFKKENDG FVYRQQEARV
160 170 180 190 200
FESMLADNQE GCVIACGAGS MERNGQRVLK EFAQTHPVIH VIRDPESIQS
210 220 230 240 250
YLKAWDTQKV RHFLELSGPI YRGCSNLEFF NLSEARSDSD DASPTHRTEP
260 270 280 290 300
RSHTPVPFLT LKRVQRDFLR FIAFITGDIA ELNSQHASFP LSLLPVESRM
310 320 330 340 350
YTSAVSVPFS KVCEKGIDIE QLEFTADAFE LAVDVTDPSG QSGLSSSLAD
360 370 380 390 400
SISQAVATIR RNIIVPLIYH VESYPTSTGS LSPSQVPMRS TDETYLNLVR
410 420 430 440 450
HGLRLSAGFL TVDLTRDDSI ISQIISASGR TRIIGHFEAF HPLPGGWDGD
460 470 480 490 500
EYMKVYERAK SLGCDIVRLC QPAETPEDNL AVQRFRHRVQ SLPVAGLSLI
510 520 530 540 550
AYNTGPLGRM SRCFNPILSP VTHASLVTEL PTHLRSWITA CEAQKALYSS
560 570 580 590 600
FALDPMQFFV FGANTTYSLS PAMHNTAFKV CGLPHKYSIH QSPTLRGLND
610 620 630 640 650
LVENQYFGGS SVSLPYKTEC IPLLHSMSAH ARAIGAINTL IPIRNIDDLD
660 670 680 690 700
DTRLQESSVF LQKSRAGPIK GLHGDNTDWI GICNCIRRGL SPANAVRSSS
710 720 730 740 750
TGLVVGSGGM ARAAIYSMIH LGVQNIFVYN RTLANAERLA HHYNRQDLRS
760 770 780 790 800
KEASGSGRPT VHIIASLSDP WPADFKQPTI VVSGIPAHSI GGEPAPNFQM
810 820 830 840 850
PTQWLESPTG GVVVDLAYKP LNTPLMKQTR ALSHRGWVAL DGLDVLPEQG
860 870 880 890
FAQFELFTGR RAPRRVMRSI VLQEYKGDEG NNDHETIQDR LQQMDGQPT
Length:899
Mass (Da):99,215
Last modified:December 16, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2A235056D9954851
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AM920428 Genomic DNA Translation: CAP91910.1

NCBI Reference Sequences

More...
RefSeqi
XP_002559266.1, XM_002559220.1

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
CAP91910; CAP91910; PCH_Pc13g08410

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
8311577

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
pcs:Pc13g08410

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM920428 Genomic DNA Translation: CAP91910.1
RefSeqiXP_002559266.1, XM_002559220.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi1108849.XP_002559266.1

Genome annotation databases

EnsemblFungiiCAP91910; CAP91910; PCH_Pc13g08410
GeneIDi8311577
KEGGipcs:Pc13g08410

Phylogenomic databases

eggNOGiKOG0692 Eukaryota
COG0169 LUCA
HOGENOMiCLU_008871_0_1_1
OMAiMIVSCIP
OrthoDBi187464at2759

Enzyme and pathway databases

BioCyciPCHR:PC13G08410-MONOMER

Family and domain databases

CDDicd00502 DHQase_I, 1 hit
Gene3Di3.20.20.70, 1 hit
InterProiView protein in InterPro
IPR013785 Aldolase_TIM
IPR001381 DHquinase_I
IPR036291 NAD(P)-bd_dom_sf
IPR027417 P-loop_NTPase
IPR041121 SDH_C
IPR031322 Shikimate/glucono_kinase
IPR013708 Shikimate_DH-bd_N
IPR006151 Shikm_DH/Glu-tRNA_Rdtase
PfamiView protein in Pfam
PF01487 DHquinase_I, 1 hit
PF18317 SDH_C, 1 hit
PF01488 Shikimate_DH, 1 hit
PF08501 Shikimate_dh_N, 1 hit
PF01202 SKI, 1 hit
SUPFAMiSSF51735 SSF51735, 1 hit
SSF52540 SSF52540, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiB6H4C4_PENRW
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B6H4C4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: February 26, 2020
This is version 58 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again