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Entry version 81 (16 Oct 2019)
Sequence version 1 (25 Nov 2008)
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Protein

Pre-mRNA-processing protein 40A

Gene

PRP40A

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Interacts with both the phosphorylated and the dephosphorylated forms of the CTD domain of the RPB1 subunit of the RNA polymerase II.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • RNA binding Source: GO_Central

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processTranscription, Transcription regulation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Pre-mRNA-processing protein 40A
Alternative name(s):
Mediator of RNA polymerase II transcription subunit 35a
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:PRP40A
Synonyms:MED35_1, MED35A
Ordered Locus Names:At1g44910
ORF Names:F27F5.2, T12C22.20
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT1G44910

The Arabidopsis Information Resource

More...
TAIRi
locus:2194894 AT1G44910

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

No visible phenotype, probably due to the redundancy with PRP40B and PRP40C.1 Publication

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004183571 – 958Pre-mRNA-processing protein 40AAdd BLAST958

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei387PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
B6EUA9

PRoteomics IDEntifications database

More...
PRIDEi
B6EUA9

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
B6EUA9

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Ubiquitous. Highest expression in roots and cauline leaves.1 Publication

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
B6EUA9 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
B6EUA9 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of the Mediator complex.

Interacts with RPB205 (via CTD domain).

2 Publications

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
26282, 1 interactor

STRING: functional protein association networks

More...
STRINGi
3702.AT1G44910.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
B6EUA9

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini184 – 217WW 1PROSITE-ProRule annotationAdd BLAST34
Domaini225 – 258WW 2PROSITE-ProRule annotationAdd BLAST34
Domaini404 – 458FF 1Add BLAST55
Domaini471 – 526FF 2Add BLAST56
Domaini532 – 593FF 3Add BLAST62
Domaini611 – 674FF 4Add BLAST64
Domaini679 – 734FF 5Add BLAST56
Domaini736 – 801FF 6Add BLAST66

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi5 – 153Pro-richAdd BLAST149
Compositional biasi7 – 58Gln-richAdd BLAST52
Compositional biasi270 – 315Ser-richAdd BLAST46
Compositional biasi467 – 470Poly-Arg4
Compositional biasi595 – 600Poly-Glu6
Compositional biasi737 – 861Glu-richAdd BLAST125
Compositional biasi805 – 883Lys-richAdd BLAST79

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the PRPF40 family.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0152 Eukaryota
COG5104 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000030620

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
B6EUA9

KEGG Orthology (KO)

More...
KOi
K12821

Identification of Orthologs from Complete Genome Data

More...
OMAi
PHYPPMG

Database of Orthologous Groups

More...
OrthoDBi
1112854at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
B6EUA9

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00201 WW, 2 hits

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.10.440, 5 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002713 FF_domain
IPR036517 FF_domain_sf
IPR039726 Prp40-like
IPR001202 WW_dom
IPR036020 WW_dom_sf

The PANTHER Classification System

More...
PANTHERi
PTHR11864 PTHR11864, 2 hits

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01846 FF, 3 hits
PF00397 WW, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00441 FF, 5 hits
SM00456 WW, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF51045 SSF51045, 2 hits
SSF81698 SSF81698, 5 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51676 FF, 6 hits
PS50020 WW_DOMAIN_2, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: B6EUA9-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MANNPPQSSG TQFRPMVPGQ QGQHFVPAAS QPFHPYGHVP PNVQSQPPQY
60 70 80 90 100
SQPIQQQQLF PVRPGQPVHI TSSSQAVSVP YIQTNKILTS GSTQPQPNAP
110 120 130 140 150
PMTGFATSGP PFSSPYTFVP SSYPQQQPTS LVQPNSQMHV AGVPPAANTW
160 170 180 190 200
PVPVNQSTSL VSPVQQTGQQ TPVAVSTDPG NLTPQSASDW QEHTSADGRK
210 220 230 240 250
YYYNKRTKQS NWEKPLELMT PLERADASTV WKEFTTPEGK KYYYNKVTKE
260 270 280 290 300
SKWTIPEDLK LAREQAQLAS EKTSLSEAGS TPLSHHAASS SDLAVSTVTS
310 320 330 340 350
VVPSTSSALT GHSSSPIQAG LAVPVTRPPS VAPVTPTSGA ISDTEATTIK
360 370 380 390 400
GDNLSSRGAD DSNDGATAQN NEAENKEMSV NGKANLSPAG DKANVEEPMV
410 420 430 440 450
YATKQEAKAA FKSLLESVNV HSDWTWEQTL KEIVHDKRYG ALRTLGERKQ
460 470 480 490 500
AFNEYLGQRK KVEAEERRRR QKKAREEFVK MLEECEELSS SLKWSKAMSL
510 520 530 540 550
FENDQRFKAV DRPRDREDLF DNYIVELERK EREKAAEEHR QYMADYRKFL
560 570 580 590 600
ETCDYIKAGT QWRKIQDRLE DDDRCSCLEK IDRLIGFEEY ILDLEKEEEE
610 620 630 640 650
LKRVEKEHVR RAERKNRDAF RTLLEEHVAA GILTAKTYWL DYCIELKDLP
660 670 680 690 700
QYQAVASNTS GSTPKDLFED VTEELEKQYH EDKSYVKDAM KSRKISMVSS
710 720 730 740 750
WLFEDFKSAI SEDLSTQQIS DINLKLIYDD LVGRVKEKEE KEARKLQRLA
760 770 780 790 800
EEFTNLLHTF KEITVASNWE DSKQLVEESQ EYRSIGDESV SQGLFEEYIT
810 820 830 840 850
SLQEKAKEKE RKRDEEKVRK EKERDEKEKR KDKDKERREK EREREKEKGK
860 870 880 890 900
ERSKREESDG ETAMDVSEGH KDEKRKGKDR DRKHRRRHHN NSDEDVSSDR
910 920 930 940 950
DDRDESKKSS RKHGNDRKKS RKHANSPESE SENRHKRQKK ESSRRSGNDE

LEDGEVGE
Length:958
Mass (Da):109,382
Last modified:November 25, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3A59AB9520C49912
GO
Isoform 2 (identifier: B6EUA9-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     923-926: HANS → VGTP
     927-958: Missing.

Show »
Length:926
Mass (Da):105,645
Checksum:iBB4C1DD0F7AB4053
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAF69150 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAF78276 differs from that shown. Reason: Erroneous gene model prediction.Curated

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_044036923 – 926HANS → VGTP in isoform 2. Curated4
Alternative sequenceiVSP_044037927 – 958Missing in isoform 2. CuratedAdd BLAST32

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC007915 Genomic DNA Translation: AAF69150.1 Sequence problems.
AC020576 Genomic DNA Translation: AAF78276.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE32062.1
CP002684 Genomic DNA Translation: AEE32063.1
AK316856 mRNA Translation: BAH19565.1

NCBI Reference Sequences

More...
RefSeqi
NP_001117438.1, NM_001123966.1 [B6EUA9-2]
NP_175113.2, NM_103573.4 [B6EUA9-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT1G44910.1; AT1G44910.1; AT1G44910 [B6EUA9-1]
AT1G44910.2; AT1G44910.2; AT1G44910 [B6EUA9-2]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
841057

Gramene; a comparative resource for plants

More...
Gramenei
AT1G44910.1; AT1G44910.1; AT1G44910 [B6EUA9-1]
AT1G44910.2; AT1G44910.2; AT1G44910 [B6EUA9-2]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT1G44910

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007915 Genomic DNA Translation: AAF69150.1 Sequence problems.
AC020576 Genomic DNA Translation: AAF78276.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE32062.1
CP002684 Genomic DNA Translation: AEE32063.1
AK316856 mRNA Translation: BAH19565.1
RefSeqiNP_001117438.1, NM_001123966.1 [B6EUA9-2]
NP_175113.2, NM_103573.4 [B6EUA9-1]

3D structure databases

SMRiB6EUA9
ModBaseiSearch...

Protein-protein interaction databases

BioGridi26282, 1 interactor
STRINGi3702.AT1G44910.1

PTM databases

iPTMnetiB6EUA9

Proteomic databases

PaxDbiB6EUA9
PRIDEiB6EUA9

Genome annotation databases

EnsemblPlantsiAT1G44910.1; AT1G44910.1; AT1G44910 [B6EUA9-1]
AT1G44910.2; AT1G44910.2; AT1G44910 [B6EUA9-2]
GeneIDi841057
GrameneiAT1G44910.1; AT1G44910.1; AT1G44910 [B6EUA9-1]
AT1G44910.2; AT1G44910.2; AT1G44910 [B6EUA9-2]
KEGGiath:AT1G44910

Organism-specific databases

AraportiAT1G44910
TAIRilocus:2194894 AT1G44910

Phylogenomic databases

eggNOGiKOG0152 Eukaryota
COG5104 LUCA
HOGENOMiHOG000030620
InParanoidiB6EUA9
KOiK12821
OMAiPHYPPMG
OrthoDBi1112854at2759
PhylomeDBiB6EUA9

Miscellaneous databases

Protein Ontology

More...
PROi
PR:B6EUA9

Gene expression databases

ExpressionAtlasiB6EUA9 baseline and differential
GenevisibleiB6EUA9 AT

Family and domain databases

CDDicd00201 WW, 2 hits
Gene3Di1.10.10.440, 5 hits
InterProiView protein in InterPro
IPR002713 FF_domain
IPR036517 FF_domain_sf
IPR039726 Prp40-like
IPR001202 WW_dom
IPR036020 WW_dom_sf
PANTHERiPTHR11864 PTHR11864, 2 hits
PfamiView protein in Pfam
PF01846 FF, 3 hits
PF00397 WW, 2 hits
SMARTiView protein in SMART
SM00441 FF, 5 hits
SM00456 WW, 2 hits
SUPFAMiSSF51045 SSF51045, 2 hits
SSF81698 SSF81698, 5 hits
PROSITEiView protein in PROSITE
PS51676 FF, 6 hits
PS50020 WW_DOMAIN_2, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPR40A_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B6EUA9
Secondary accession number(s): B3H7M9
, B9DFP8, Q9LPD8, Q9MAL4
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 11, 2012
Last sequence update: November 25, 2008
Last modified: October 16, 2019
This is version 81 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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