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Protein
Submitted name:

E3 ubiquitin-protein ligase RNF4-like

Gene

RNF4

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
E3 ubiquitin-protein ligase RNF4-likeImported
Submitted name:
RING finger protein 4Imported
Gene namesi
Name:RNF4Imported
Synonyms:LOC106604900Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini134 – 179RING-typeInterPro annotationAdd BLAST46

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

HOVERGENiHBG018577
KOiK22651

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PfamiView protein in Pfam
PF13639 zf-RING_2, 1 hit
SMARTiView protein in SMART
SM00184 RING, 1 hit
PROSITEiView protein in PROSITE
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

B5X9Z3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSTTQRKRR TGVPSSSRHT AKSSRVTTTS VRPRAAASAA VPETIDVLES
60 70 80 90 100
SRTSSEEVVD LTCEGSELTV VDLTNNDSVV VVDEGPHGRR EADSESYVLS
110 120 130 140 150
SDEEEDTNGG LSADLLSSLQ ASSRARSTPG TVSCPVCMDA YAEIIESGRL
160 170 180 190
VVSTKCGHLF CSHCLRDSLL RSHTCPTCRK KLTHKQCHPI YI
Length:192
Mass (Da):20,685
Last modified:November 25, 2008 - v1
Checksum:i624C5399EE8F6CF0
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
B5XCA5B5XCA5_SALSA
E3 ubiquitin-protein ligase RNF4-li...
RNF4 LOC106611998
188Annotation score:
B9ENH1B9ENH1_SALSA
E3 ubiquitin-protein ligase RNF4-li...
RNF4 LOC106610992
187Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT047862 mRNA Translation: ACI67663.1
BT056906 mRNA Translation: ACM08778.1
BT125543 mRNA Translation: ADM16284.1
RefSeqiXP_014055489.1, XM_014200014.1
UniGeneiSsa.41420

Genome annotation databases

GeneIDi106604900
KEGGisasa:106604900

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT047862 mRNA Translation: ACI67663.1
BT056906 mRNA Translation: ACM08778.1
BT125543 mRNA Translation: ADM16284.1
RefSeqiXP_014055489.1, XM_014200014.1
UniGeneiSsa.41420

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106604900
KEGGisasa:106604900

Phylogenomic databases

HOVERGENiHBG018577
KOiK22651

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PfamiView protein in Pfam
PF13639 zf-RING_2, 1 hit
SMARTiView protein in SMART
SM00184 RING, 1 hit
PROSITEiView protein in PROSITE
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB5X9Z3_SALSA
AccessioniPrimary (citable) accession number: B5X9Z3
Entry historyiIntegrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: July 18, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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