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Protein
Submitted name:

Transcription factor HES-1

Gene

HES1

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor HES-1Imported
Submitted name:
transcription factor HES-4-B-like isoform X1Imported
Gene namesi
Name:HES1Imported
Synonyms:LOC106572133Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 91BHLHInterPro annotationAdd BLAST58
Domaini110 – 143OrangeInterPro annotationAdd BLAST34

Phylogenomic databases

HOVERGENiHBG005960
KOiK06054

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR003650 Orange_dom
PfamiView protein in Pfam
PF07527 Hairy_orange, 1 hit
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SM00511 ORANGE, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
PS51054 ORANGE, 1 hit

Sequencei

Sequence statusi: Complete.

B5X993-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPADTMEKQT ASPIAGAPAN GSHTPDKPKN ASEHRKSSKP IMEKRRRARI
60 70 80 90 100
NESLGQLKTL ILDALKKDSS RHSKLEKADI LEMTVKHLRN LQRVQMTAAL
110 120 130 140 150
SADTTVLSKY RAGFNECMNE VTRFLSTSEG VNTEVKSRLL NHLSGSLGQM
160 170 180 190 200
IAMNYPQPTP TQQAHLAQPL HVQLPSTVPN SVSMGSKLST VEALSPKVFG
210 220 230 240 250
GFQLVPATDG QFAFLIPNPA FASASTPVIP LYANAGVPMT VNASPIHCSS
260 270 280 290
APTASSPVHG MTSFVGVSQA VSPVGVSTGS ESTEAVWRPW
Length:290
Mass (Da):30,991
Last modified:November 25, 2008 - v1
Checksum:i281F4414A632821C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT047612 mRNA Translation: ACI67413.1
RefSeqiXP_014001474.1, XM_014145999.1
UniGeneiSsa.36529

Genome annotation databases

GeneIDi106572133
KEGGisasa:106572133

Similar proteinsi

Entry informationi

Entry nameiB5X993_SALSA
AccessioniPrimary (citable) accession number: B5X993
Entry historyiIntegrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: February 28, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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