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Protein
Submitted name:

Transcription factor HES-5

Gene

HES5

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor HES-5Imported
Submitted name:
hairy and enhancer of split 5Imported
Gene namesi
Name:HES5Imported
Synonyms:hes5Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliB5X660
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini19 – 75BHLHInterPro annotationAdd BLAST57
Domaini92 – 122OrangeInterPro annotationAdd BLAST31

Phylogenomic databases

HOVERGENiHBG005960
KOiK06055

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR003650 Orange_dom
PfamiView protein in Pfam
PF07527 Hairy_orange, 1 hit
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
PS51054 ORANGE, 1 hit

Sequencei

Sequence statusi: Complete.

B5X660-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVPTITSAMI YSKEHLTLTN KLRKPVVEKL RRDRINNSIE QLKSLLVPEI
60 70 80 90 100
LNQQPDSKLD KADILEMTVC ILRQQQQNQS VSSSSCSAPV NQGYSRCVQE
110 120 130 140 150
IVNFLSKDEL KTQSQRRLLS HFQSLQQSSE KNRREIDLPQ LSSPVQHSIS
160
KDKSPVNITL WRPW
Length:164
Mass (Da):18,895
Last modified:November 25, 2008 - v1
Checksum:iD936ED91C3A88C49
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT046529 mRNA Translation: ACI66330.1
RefSeqiNP_001134136.1, NM_001140664.1
UniGeneiSsa.10887

Genome annotation databases

GeneIDi100195635
KEGGisasa:100195635

Similar proteinsi

Entry informationi

Entry nameiB5X660_SALSA
AccessioniPrimary (citable) accession number: B5X660
Entry historyiIntegrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: February 28, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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